Pairwise Alignments

Query, 352 a.a., Ribose operon repressor from Xanthomonas campestris pv. campestris strain 8004

Subject, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score =  153 bits (386), Expect = 7e-42
 Identities = 109/336 (32%), Positives = 170/336 (50%), Gaps = 8/336 (2%)

Query: 19  VATINDIARMSGVSKKTVSRIINNSPLVRQDTREKVEALMREVGYAPDPLARGLAFRRSF 78
           +ATI D+A ++G+S  TVS ++NN+  V +  R KVEA + ++ Y P  +AR L  + + 
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNNTRPVSEPVRLKVEAAIAQLDYVPSAVARSLKAKTTS 60

Query: 79  LIGMVYDNPTAQYIVDMQYGALDALRGSSFELVVHPCDSRSPGYIEGVRRFAQAQKLHGV 138
            IG++  N    Y  ++  G  D    + F +++   D  +P    G  R    +++ G+
Sbjct: 61  TIGLLIPNGMNPYFAELARGIEDYCERNGFCVILCNSDD-NPEKQRGYLRVLLEKRVDGL 119

Query: 139 ILVPRASEDQALADMLAEIGCRYTRIASIALDTTSQTVITHDRD-GAAEAADYLLSLGHR 197
           I V     D  +A  LAE+      I    LD     ++  D + GA  A  +LL LGHR
Sbjct: 120 I-VSSVGGDAGIAGGLAEVRTPLV-IVDRELDGIDADMVRIDHEQGAYLATRHLLDLGHR 177

Query: 198 DIALVTGPSAYRSSIERTAGFADALTRRGIELPPERIVEAGYTFESGVAAAEKLLLGKKR 257
            IA + GP     +  R AG+  AL +  + +  E  + + +T  +G  AA +LL     
Sbjct: 178 AIACIGGPFHSTVAEMRLAGYRRALQQASVPVRAEWALHSEFTSSAGHEAACQLLAAHP- 236

Query: 258 PTAIFTGNDEMAAGIYKVALRAGINIPRQLSVIGYDDSSLASRLWPPLTSVRRHTRDTGR 317
           PTAIF GND +A G+ + A    I +P+ LSVIG+DD  ++  ++P LT+V +     G 
Sbjct: 237 PTAIFAGNDVIAIGVLRAAAERLIRVPQDLSVIGFDDIQMSRYVYPALTTVGQSIMQLGE 296

Query: 318 TAAAMLIQPDNAPQLPTAS---VRPHLIVRDSCQPP 350
           TAA ML+     P    A    V P ++VR+S   P
Sbjct: 297 TAAEMLLSRIATPHALPAEKRLVTPSVVVRESTAAP 332