Pairwise Alignments

Query, 352 a.a., Ribose operon repressor from Xanthomonas campestris pv. campestris strain 8004

Subject, 351 a.a., transcriptional regulator xylR from Caulobacter crescentus NA1000

 Score =  194 bits (494), Expect = 2e-54
 Identities = 122/339 (35%), Positives = 181/339 (53%), Gaps = 15/339 (4%)

Query: 20  ATINDIARMSGVSKKTVSRIINNSPLVRQDTREKVEALMREVGYAPDPLARGLAFRRSFL 79
           ATI D+A  +GVS  TVSR+IN    V+++TR+ VE  + ++ YAP+P AR LA    F 
Sbjct: 16  ATIRDVAARAGVSPMTVSRVINRESTVKEETRQLVEKAIADLNYAPNPAARSLAGSAPFR 75

Query: 80  IGMVYDNPTAQYIVDMQYGALDALRGSSFELVVHPCDSRSPGYIEGVRRFAQAQKLHGVI 139
           IG++YDNP+  Y+ +   GALD    +  ++V+  C    P              + G+I
Sbjct: 76  IGLLYDNPSTGYLSEFLVGALDESSRTGAQIVIEKC--AEPELARATLARLLKTGVDGLI 133

Query: 140 LVPRASEDQALADMLAEIGCRYTRIASIALDTTSQTVITH--DRDGAA-EAADYLLSLGH 196
           L P   E     ++LAEI        ++A  T S  + T   D + AA E   +L+ LGH
Sbjct: 134 LPPPLCESP---EVLAEIRAAGAAAVAVAPGTASADMATIRIDNEAAAFELTQHLIGLGH 190

Query: 197 RDIALVTGPSAYRSSIERTAGFADALTRRGIELPPERIVEAGYTFESGVAAAEKLLLGKK 256
           +    + G      S +R  GF  AL   GI     R+ +  +T+ SG+ AAE+LL  + 
Sbjct: 191 KRFGFIKGHPNQTVSQQRLDGFMTALKAAGIPQENIRVEQGYFTYRSGLEAAERLLAAEP 250

Query: 257 RPTAIFTGNDEMAAGIYKVALRAGINIPRQLSVIGYDDSSLASRLWPPLTSVRRHTRDTG 316
           RPTAIF  ND+MAA    VA R G+++P  +S++G+DD+S+A  +WPPLT+V +      
Sbjct: 251 RPTAIFAANDDMAAATAGVAHRLGLDVPGDVSIVGFDDTSIADNIWPPLTTVHQPIAAMA 310

Query: 317 RTAAAMLIQP-----DNAPQLPTASVRPH-LIVRDSCQP 349
           R A  ++++      D   + P   + PH LIVRDS  P
Sbjct: 311 RAAVDLVLEEIRRHRDGGGE-PRQLMHPHTLIVRDSSGP 348