Pairwise Alignments

Query, 352 a.a., Ribose operon repressor from Xanthomonas campestris pv. campestris strain 8004

Subject, 346 a.a., transcriptional regulator, LacI family from Paraburkholderia bryophila 376MFSha3.1

 Score =  164 bits (416), Expect = 2e-45
 Identities = 121/342 (35%), Positives = 172/342 (50%), Gaps = 24/342 (7%)

Query: 19  VATINDIARMSGVSKKTVSRIINNSPLVRQDTREKVEALMREVGYAPDPLARGLAFRRSF 78
           +ATI D+A ++GVS  TVS ++NNS  V  D R KVE  +R++ Y P  +AR L  R + 
Sbjct: 1   MATIKDVAAVAGVSFTTVSHVVNNSRPVSADVRAKVEHAIRQLHYVPSAVARSLKARATA 60

Query: 79  LIGMVYDNPTAQYIVDMQYGALDALRGSSFELVVHPCDS-RSPGYIEGVRRFAQAQKLHG 137
            IG+V  N T  Y  ++  G  D    + +   V  C+S   P       R  Q +++ G
Sbjct: 61  TIGLVVPNSTNPYFAELARGIEDGCARNGY--CVFFCNSDDDPAKQRNYLRVLQEKRIDG 118

Query: 138 VILVPRASEDQALADMLAEIGCRYTRIASIALDTTSQTV------ITHDRDGAAEAADYL 191
           +I V  A +D  LA  LA+      R   + +D   + V      I H++ GA  A  +L
Sbjct: 119 LI-VASAGDDAVLAQTLAD-----AREPLVIVDRNIEGVNADLVQIDHEK-GAYLATRHL 171

Query: 192 LSLGHRDIALVTGPSAYRSSIERTAGFADALTRRGIELPPERIVEAGYTFESGVAAAEKL 251
           L LGH  I  ++GP     S  R  GF  A+T RGIE+PP  IVE+ ++   G  AA + 
Sbjct: 172 LELGHVQIGCISGPVETAVSAMRVHGFIRAMTERGIEIPPNAIVESDFSGTGGHRAAAQ- 230

Query: 252 LLGKKRPTAIFTGNDEMAAGIYKVALRAGINIPRQLSVIGYDDSSLASRLWPPLTSVRRH 311
           L    +P+AIF  ND M  G  + A    I++PR  S+IG+DD  L    +P L++V + 
Sbjct: 231 LFDTLKPSAIFACNDMMGIGALRAAAERNISVPRDCSIIGFDDIELGRFTYPALSTVGQS 290

Query: 312 TRDTGRTAAAMLIQ----PDNAPQLPTAS---VRPHLIVRDS 346
            R  G  AA  LI+      +A   P      V P LIVR+S
Sbjct: 291 VRALGDMAAQTLIERIAGKSSASARPAGRRRVVSPRLIVRES 332