Pairwise Alignments

Query, 673 a.a., Excinuclease ABC subunit B from Xanthomonas campestris pv. campestris strain 8004

Subject, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

 Score =  912 bits (2357), Expect = 0.0
 Identities = 453/674 (67%), Positives = 554/674 (82%), Gaps = 1/674 (0%)

Query: 1   MTDRFELVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPT 60
           M+  FELVS Y PAGDQP AI +L+   EAGLA QTLLGVTGSGKT+T+ANV+   Q+PT
Sbjct: 1   MSKAFELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPT 60

Query: 61  LVMAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE 120
           +++APNKTLAAQLYGE K+FFPNNAVEYFVSYYDYYQPEAYVP++DTFIEKD+S+N HIE
Sbjct: 61  IILAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE 120

Query: 121 QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSIGEHIDQRQLIRHLTDLQ 180
           QMRLSATK LL R+D+++VA+VSAIYGLG P+ YL + L L  G+ I+QR ++R L +LQ
Sbjct: 121 QMRLSATKALLERKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQ 180

Query: 181 YTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGE-TLRKLQ 239
           Y+RN+    RG FRVRGEV+D+FPAESD EA+R+E+FD +IE ++LFDPLTG  T R L 
Sbjct: 181 YSRNDMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLA 240

Query: 240 RYTVYPKTHYATTRERTLSAVDTIKEELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAE 299
           R+T+YPKTHY T RER L A++ IK EL+ R + L   NKL+E QR++QRTQFD+EMM E
Sbjct: 241 RFTIYPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNE 300

Query: 300 VGFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKE 359
           +GFC+GIENYSR+L+G+A GEPPPTLFDYLP D LL+IDESHVT+PQIGAM+KGDRSRKE
Sbjct: 301 LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKE 360

Query: 360 TLVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEITELVVRPTGLI 419
           TLVEFGFRLPSALDNRPL+F+E+EA +P++I+VSATP  YEL +S GE+ E VVRPTGL+
Sbjct: 361 TLVEFGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLL 420

Query: 420 DPVVEIRPVGTQVDDLMSEVHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSD 479
           DP++E+RPV TQVDDL+SE   R    +R+LVTTLTKRMAE+LTEYL EHG++VRYLHSD
Sbjct: 421 DPIIEVRPVATQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSD 480

Query: 480 IDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTI 539
           IDTVERVEIIRDLRLG FDVLVGINLLREGLDMPEV+LVAILDADKEGFLRS  SLIQT+
Sbjct: 481 IDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTM 540

Query: 540 GRAARNLRGKAILYADKMTRSMQAAIDETDRRREKQVEYNLEHGITPKSVARPISDIMEG 599
           GRAARN+ GKAILYAD +T+SM+ AIDET+RRREKQ+ YN + GITP+ + R + DIME 
Sbjct: 541 GRAARNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIMEL 600

Query: 600 AREDAAEKKAGKGRSKSRQVAEEPADYRAMGPAEIAGKLKALEQKMYQHAKDLEFEAAAQ 659
                + K+         +VAEE A Y+ + P ++  ++  LE  MYQHA++LEFE AAQ
Sbjct: 601 GDIAKSRKQKNSKVVPLAKVAEESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAAQ 660

Query: 660 IRDQILKLKAASLA 673
            RD+I +L+   +A
Sbjct: 661 KRDEIHQLRQQFIA 674