Pairwise Alignments

Query, 673 a.a., Excinuclease ABC subunit B from Xanthomonas campestris pv. campestris strain 8004

Subject, 985 a.a., excinuclease ABC subunit B from Sinorhizobium meliloti 1021

 Score =  776 bits (2005), Expect = 0.0
 Identities = 394/670 (58%), Positives = 494/670 (73%), Gaps = 15/670 (2%)

Query: 9   SPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPTLVMAPNKT 68
           S Y PAGDQP AI  LV    +G   Q LLGVTGSGKT+T+A V++  Q+P +++APNKT
Sbjct: 162 SDYEPAGDQPTAIADLVDGLTSGERNQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKT 221

Query: 69  LAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIEQMRLSATK 128
           LAAQLY EFK+FFP+NAVEYFVSYYDYYQPEAYVP SDT+IEK+SSINE I++MR SAT+
Sbjct: 222 LAAQLYSEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATR 281

Query: 129 TLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSIGEHIDQRQLIRHLTDLQYTRNEFEL 188
           +LL R D ++VA+VS IYG+G+ E Y ++   +S+G+ +DQRQL+  L   QY R + + 
Sbjct: 282 SLLERDDVIIVASVSCIYGIGSVETYTAMTFQMSVGDRLDQRQLLADLVAQQYKRRDMDF 341

Query: 189 TRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQRYTVYPKTH 248
            RG+FRVRG+ +++FPA  +  A RI +F  +I+ +T FDPLTG+    L+   +Y  +H
Sbjct: 342 QRGSFRVRGDTIEIFPAHLEDAAWRISMFGDEIDSITEFDPLTGQKTGDLKSVKIYANSH 401

Query: 249 YATTRERTLSAVDTIKEELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEVGFCNGIEN 308
           Y T R    +A+  IKEE+ +RL +L    +L+EAQRL QRT++D+EM+   G C GIEN
Sbjct: 402 YVTPRPTLNAAIKAIKEEMSQRLAELERAGRLLEAQRLEQRTRYDIEMLEATGSCQGIEN 461

Query: 309 YSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKETLVEFGFRL 368
           YSR+LTG+ PGEPPPTLF+Y+P +AL+ IDESHVTIPQIG MY+GD  RK TL E+GFRL
Sbjct: 462 YSRYLTGRRPGEPPPTLFEYIPDNALIFIDESHVTIPQIGGMYRGDFRRKATLAEYGFRL 521

Query: 369 PSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEITELVVRPTGLIDPVVEIRPV 428
           PS +DNRPLRFEEW+A  P +I VSATPG +E+ ++ G   E V+RPTGLIDP VE+R  
Sbjct: 522 PSCMDNRPLRFEEWDAMRPDTIAVSATPGAWEMEQAGGVFAEQVIRPTGLIDPPVEVRSA 581

Query: 429 GTQVDDLMSEVHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSDIDTVERVEI 488
            TQVDD++ E+ E    G R LVT LTKRMAE+LTEYL E G+RVRY+HSDIDT+ER+EI
Sbjct: 582 KTQVDDVLGEIRETAAAGYRTLVTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEI 641

Query: 489 IRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIGRAARNLRG 548
           IRDLRLG FDVLVGINLLREGLD+PE   VAILDADKEGFLRS  SLIQTIGRAARN+ G
Sbjct: 642 IRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDG 701

Query: 549 KAILYADKMTRSMQAAIDETDRRREKQVEYNLEHGITPKSVARPISDIMEGAREDAAEKK 608
           K ILYAD +T SMQ A++ET RRREKQ+ YN EHGITP+SV   ISDI++   E    + 
Sbjct: 702 KVILYADTITGSMQRAMEETSRRREKQMAYNAEHGITPESVKAKISDILDSVYERDHVRA 761

Query: 609 -----AGKGRSKSRQVAEEPADYRAMGPAEIAGKLKALEQKMYQHAKDLEFEAAAQIRDQ 663
                AGKG           AD   +    +   L ALE++M   A DL+FE AA++RD+
Sbjct: 762 DISGVAGKGF----------ADGGHLVGNNLQAHLNALEKQMRDAAADLDFEKAARLRDE 811

Query: 664 ILKLKAASLA 673
           I +LKAA LA
Sbjct: 812 IKRLKAAELA 821