Pairwise Alignments

Query, 673 a.a., Excinuclease ABC subunit B from Xanthomonas campestris pv. campestris strain 8004

Subject, 733 a.a., Excinuclease ABC, B subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  769 bits (1986), Expect = 0.0
 Identities = 390/672 (58%), Positives = 490/672 (72%), Gaps = 19/672 (2%)

Query: 5   FELVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPTLVMA 64
           F L S Y PAGDQP AI +L+    A    Q LLGVTGSGKT+T+A V+ ++ +PTL++A
Sbjct: 38  FRLASDYQPAGDQPQAIAELLRGLAAQDRDQVLLGVTGSGKTFTMAQVIAEMGRPTLILA 97

Query: 65  PNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIEQMRL 124
           PNKTLAAQLYGEFK+FFP+NAVEYFVSYYDYYQPEAYVP +DT+IEKDSSINE I++MR 
Sbjct: 98  PNKTLAAQLYGEFKNFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRH 157

Query: 125 SATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSIGEHIDQRQLIRHLTDLQYTRN 184
           +AT+ LL RRD ++VA+VS IYG+G+ E Y  + + + +G  + +  L++ L +LQ+TRN
Sbjct: 158 AATRALLERRDVIIVASVSCIYGIGSVESYSRMIIPIKVGTTLPRADLLKALVELQFTRN 217

Query: 185 EFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQRYTVY 244
           +   TRG FRVRG+ +++FPA  +  A R+ L+  +IE +  FDPLTGE    L   TVY
Sbjct: 218 DIAFTRGMFRVRGDSVEIFPAHYEDRAWRVSLWGDEIESVREFDPLTGEITASLDEVTVY 277

Query: 245 PKTHYATTRERTLSAVDTIKEELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEVGFCN 304
           P +H+ T R     AV TIK ELKE L + Y Q K++EAQRL QRT FDLEM+   G C 
Sbjct: 278 PASHHVTPRPALSQAVRTIKAELKETLARFYDQGKVLEAQRLEQRTTFDLEMIEATGHCK 337

Query: 305 GIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKETLVEF 364
            IENYSRHLTG+ PG+PPPTLF+YLP DALL +DESHV +PQIG M++GD +RK  L EF
Sbjct: 338 SIENYSRHLTGRRPGDPPPTLFEYLPEDALLFVDESHVAVPQIGGMFRGDFNRKSVLAEF 397

Query: 365 GFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEITELVVRPTGLIDPVVE 424
           GFRLPS +DNRPL+FEEW+   P SI+VSATPG +EL  + G + E V+RPTGL+DPV  
Sbjct: 398 GFRLPSCVDNRPLKFEEWDVMRPPSIFVSATPGRWELERTGGVVAEQVIRPTGLVDPVCI 457

Query: 425 IRPVGTQVDDLMSEVHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSDIDTVE 484
           IRPV  QVDDL+ EV      G+RVLVTTLTKRM+E+LTEYL E G+RVRY+HSDI+T+E
Sbjct: 458 IRPVEAQVDDLLGEVKACAARGERVLVTTLTKRMSEDLTEYLTEQGVRVRYMHSDIETLE 517

Query: 485 RVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIGRAAR 544
           R+EIIRDLRLG FDVLVGINLLREGLD+PE +LVAILDADKEGFLRS  SLIQTIGRAAR
Sbjct: 518 RIEIIRDLRLGAFDVLVGINLLREGLDIPECALVAILDADKEGFLRSRTSLIQTIGRAAR 577

Query: 545 NLRGKAILYADKMTRSMQAAIDETDRRREKQVEYNLEHGITPKSVARPISDIMEGARE-- 602
           N+ G+ ILYADKMT S+  AI+ET RRR++Q +YN  HGITP++V   ISD++    E  
Sbjct: 578 NVGGRVILYADKMTDSLTFAIEETSRRRQRQQDYNAAHGITPETVRSRISDVLSSVYEKD 637

Query: 603 --DAAEKKAGKGRSKSRQVAEEPADYRAMGPAEIAGKLKALEQKMYQHAKDLEFEAAAQI 660
                   +G  +   + + E  AD               L+++M   A DLEFE A ++
Sbjct: 638 YVTVTTGVSGDNQLVGKSLREHLAD---------------LDKRMRAAAADLEFEEAGRL 682

Query: 661 RDQILKLKAASL 672
           RD+I +L+A  L
Sbjct: 683 RDEIRRLEALDL 694