Pairwise Alignments

Query, 1296 a.a., FIG005080: Possible exported protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 1436 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  210 bits (534), Expect = 9e-58
 Identities = 306/1340 (22%), Positives = 518/1340 (38%), Gaps = 114/1340 (8%)

Query: 10   RLFRRYAITASALALVALAVLVGAASQALPLAEQHPQQIAAWLSERAGQPIRFDRLQTEW 69
            R F R      A+ +V  A+ V      LP  +Q  Q++ +++ E+    +    L  EW
Sbjct: 8    RTFGRLCWQMIAIIVVLFALSVSLFRGLLPKLDQVRQELVSYIYEQYQVKVEVSELTAEW 67

Query: 70   TRRGPLLRLDGLRIGPNGDVRV----GQAEVVLAMYAGLLPGHALTE-VRLRGLALTLQ- 123
               GP + +  L +    ++ V        + L  +  L+      E V   G+ + L  
Sbjct: 68   QAFGPAVTIKNLVLPVQENLPVTFIIDNVHLKLDFWDSLVSASPQIENVIFEGVKIALDL 127

Query: 124  ----RGDDGVWSVQGLPSGRHADPLDAL--RRLGEIQVSEARLHIDAPSIGLDTTLPRID 177
                +  +G  S     + ++ D L AL   +     +++  + + + +        R D
Sbjct: 128  DRISQAGNGQQSSDAPVAEQNTDWLYALMLEQFDRFAITDVTMQLISSTHKYRPIHIR-D 186

Query: 178  LRLRVQGATLRVGSRSWID-----LARAPLTSVLEFDR---DSGDGSAYAQAAPADLAAW 229
            LR R      R     ++D     + R  L   +  D    +S  G  Y  A   DL  W
Sbjct: 187  LRWRNLAGRHRAEGALFLDEQASEVERLSLAVDIRGDGHNPESLTGQLYLAANSLDLGEW 246

Query: 230  ASLLQ---AGGVRVD-GGSGRLQAWAQLRARRVSAVTVVADLTQVQLSGAPLAGESARRT 285
            AS  +   A G ++   G   LQAWA+   R  +A TV  + + +Q     L GE  +  
Sbjct: 247  ASRQENPYASGKKLPLEGVVNLQAWAEFSNRAFTAATVAFEPSWLQWQ---LKGEQQKFE 303

Query: 286  LKWERLQARARWQTVAGGWRLDAPQLRL---GSANTLQHLDGLSIAAGRRYAVVGDALDV 342
            +K  +L     WQ    GW+L +  L     G A    H+ G      R  A +   LD 
Sbjct: 304  IKAGQLN----WQPQVSGWQLTSSDLAFVTNGQAWPALHI-GARKRDDRLMASINQ-LDA 357

Query: 343  SGLIAAAALSDQLS-PGLRRWLALSRPQLRVSKLQLA-GEQGGAVRAQGQVEELAFQPVG 400
              L+    L   +   GL  W ++  P+  + +L+L  GEQ G   +  Q+++ A+Q  G
Sbjct: 358  EVLLPLLPLVPGMDLDGLYLWQSMD-PKGSIEQLKLGYGEQQGFALS-AQLKQFAWQGSG 415

Query: 401  KSPGISGLRGHFDGDAQAIALQTAPDATLRFDWPTGFGVVHEVQLAGSI--VGWRDGDGW 458
              PG   +          + L +AP      D+  GF     + LAG    V +  G+  
Sbjct: 416  AIPGAEPIDLMLGMQGSDLYL-SAPAQQYHLDFNGGFE--EALSLAGDAFTVKYALGEAE 472

Query: 459  QVATPALRVQAKDYGANLRGGMWFQNDGTRPRISLAAQLDDAALPVARKFWIRSKMSKAA 518
             +A P L     D   +    + F  + +   ++L A +       A+ ++ +  MS++ 
Sbjct: 473  LIA-PKLHFYNADLDLDAAMKLDFAGEAS---LNLLADVQVKNAARAKYYFPKHAMSESL 528

Query: 519  IDWLDMAVAGGVITGGTGLVSGDLDDWPFDNNDGRFEAFGQIRDGEIRFQPDWPAMTQVQ 578
            +D+L  A+  G       + +G L  +P+D+N G F+A   +     RFQPDWP +T++ 
Sbjct: 529  VDYLSGAIKAGQSQDAKVVWNGPLKHFPYDDNSGVFQAGFSLNQARYRFQPDWPEVTELS 588

Query: 579  ADLRFIGNGFSLQ-GSGALAGTPVAQFGAGIPNFATSELY-VRASTQADTAQLLGMLRSS 636
             +  F      +    G L   P       IP  +   L  V+A  +        +L+ S
Sbjct: 589  LNALFENAAMDIWVNKGMLMQVPADGAHVAIPRMSHQTLLTVKADLRTQGEAAKQVLQRS 648

Query: 637  PLERRYGDTLRNLTTSGPAAVTFDLLRPLRTKGVGGHLQGTVALQGAKLADARWNLAFDQ 696
            PL    G TL  +   G  +   DL  PL   G    L G V      +  +   +  D 
Sbjct: 649  PLADTVGATLEVVQVQGEVSGKLDLSIPLYHGGKEAIL-GQVKFDNTPVYISEPGVQLDG 707

Query: 697  VSGQAEYRDSGFGAEHLSVQHQGRTGELALRAGGFVQDPAQAFEARFGATLDAKELFDRA 756
            V+G+  + +     E +    Q R  E  +    F  D  +     +G  LD +  +  A
Sbjct: 708  VTGEVYFANEVVTGEKI----QARLFEQPV---SFTFDTGKT-NKHYGLNLDMQGQWALA 759

Query: 757  --PQM--EWLRPYVHGSAPWQVGVDVPLARPGQPDVPAQLTLRSQLVGTTLDLPAPLDKP 812
              P M    L+ Y  G   WQ  + +     G      Q  ++S + G  L LP    K 
Sbjct: 760  SLPAMLDNPLKDYYSGELDWQGAMTLIFDELGYR---IQAQVKSDMQGVELSLPGKFAKT 816

Query: 813  ATQP-------LDTRVKVALPVGNGD------------------IDVAFGQLVAVKASSQ 847
            A  P       +    + +L    GD                   D+  G+L       +
Sbjct: 817  ADSPRALSFELIGDNKQASLGAKLGDQMEFWGGFDEESGDHLAHFDLLLGRLFKPGDQLK 876

Query: 848  GTQTGVRVVM-GTDTVTERPPANGLVVNGRT-ASLDAIDWISLARGSAEPDTPPLPGQPA 905
                 +++ M  T+     P   G + +    +SLD     +LA  + E        +P 
Sbjct: 877  RQAGHLQLDMPATEFAPWLPIIKGFMGDAALESSLDLAMREALAEQAPESPLVQAETEPK 936

Query: 906  QPSEKLPLLQVDVQADKLLMIGGVFPQTRLRLRPTRDAVAVTLDGPSLAGQLTVPNADGA 965
            + S   PL+ VD Q  +L + G    +  L   PT        +    +G++     D +
Sbjct: 937  KSSFFPPLIAVDGQVRQLNLYGQPLTELNLEAHPTEHGWRFEGNANEFSGRVDF-YPDWS 995

Query: 966  AVQGKLSTVRWQPVAAAPEPAAPEPGDPLAGALPEPARRAVAEFDPVSI-PPLSLDIDDL 1024
                KL   R+     + E  A E                VA  + +SI PPL++D+D  
Sbjct: 996  TQGLKLVASRFNFAPESKEGEASE----------------VASDEVLSILPPLAVDVDQF 1039

Query: 1025 RVGKMTLGAATLRSSRLTDGMQVDQLQLRSDDQNIGLTGAWRGKGEAASTRLSARVDSRN 1084
             V    LG   L+++      Q+  + + +    +   GAW        T     + ++ 
Sbjct: 1040 SVYGKPLGHLVLQATPKNGDYQIQTIAITTPGITLKGKGAWSNSEGQNLTEFQVDLKAKQ 1099

Query: 1085 LGNLLQNLTLGGQLRGGEGQLELNAGWQGSPTGFALGSLEGNLTVDARNGQLLEVDPGAG 1144
               + + L +   L+     L+    WQG+P  F+L +L G ++     G L EV     
Sbjct: 1100 FDEVSERLGIDPGLKEAPLDLQAELSWQGAPYAFSLETLNGQISYKLGKGHLSEVSDKGA 1159

Query: 1145 RVLGLLSVAQLPRRLMFDFRDFFSKGLAFNKLAGEVRFGDGFARTDAIRIEGPAADIAIR 1204
            R+  L S+  L R+L  DF D F KGL FN   G ++  +G  +T    ++  A ++ +R
Sbjct: 1160 RIFSLFSLDSLLRKLSLDFSDVFGKGLYFNAFTGTLKLDNGVVKTTDSEMDAVAGNMRVR 1219

Query: 1205 GQTDLRAQTFDQTVDVNPK-AGNLLTVVGAVAGGPVGAAVGAAANAVLGKPLGAIGAKTY 1263
            G TDL  ++ +  +   P+ A ++ TVV    GG        A   VL   +  I    +
Sbjct: 1220 GYTDLTTESLNYDIRFVPQLASSVPTVVLLSTGGWTLGLGAFALTKVLEPVIEVISEIRF 1279

Query: 1264 HVTGPWKEPQVDVVDRDARE 1283
             +TG   EP+++ ++R ++E
Sbjct: 1280 RLTGTMSEPKLEELERKSKE 1299