Pairwise Alignments

Query, 1296 a.a., FIG005080: Possible exported protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 1390 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  216 bits (550), Expect = 1e-59
 Identities = 300/1328 (22%), Positives = 516/1328 (38%), Gaps = 119/1328 (8%)

Query: 14   RYAITASALALVALAVLVGAASQALPLAEQHPQQIAAWLSERAGQPIRFDRLQTEWTRRG 73
            R+     AL LV  A+ V      LP  ++  QQ+  ++       I+   L  +W   G
Sbjct: 12   RFCWQLLALILVLFALTVSLIRGLLPQVDEVRQQLVEYVKSEYQINIQVGELSAQWQAFG 71

Query: 74   PLLRLDGLRIGPNGD----VRVGQAEVVLAMYAGLLP-GHALTEVRLRGLALTLQRGDDG 128
            P + +D L I P       V V Q ++ L  +  LL     + +V   G+ + L   D  
Sbjct: 72   PAVTIDDLVIPPQEKLPVTVLVKQVQIKLDFWQSLLTTSPRIEDVNFEGVHIALDM-DKL 130

Query: 129  VWSVQGLPSGRHADP----LDALRRLGEIQVSEARLHIDAPSIGLDTTLPRIDLR---LR 181
                 G  SG+        +  L++L    + +A + +    + L      I +R    R
Sbjct: 131  SGRTTGRVSGQSTQTDWLYILLLKQLERFSLEDASVQL----LSLHNEYRPIHIRHLNWR 186

Query: 182  VQGATLRVGSRSWID---LARAPLTSVLEFDRDSG-----DGSAYAQAAPADLAAWASL- 232
              G   R     ++D   + +  L+  L+   D+       G  Y  A   DL  WAS  
Sbjct: 187  NSGMQHRGAGEIYLDNNAMVKESLSLQLDITGDATAPDTLKGQIYLAAQSLDLGEWASRQ 246

Query: 233  ---LQAGGVRVDGGSGRLQAWAQLRARRVSAVTVVADLTQVQLSGAPLAGESARRTLKWE 289
                         G   L+AW  +  R + +  V  + + +Q S   + G+      K+E
Sbjct: 247  PNPYDPSKKLPLEGIVNLKAWFDVAHRSIRSGLVQFEPSWLQWS---MQGQPQ----KFE 299

Query: 290  RLQARARWQTVAGGWRLDAPQLRLGSANTLQHLDGLSIAAGRR----YAVVGDALDVSGL 345
                  RW+  A GW + +  L   +    +H   L +AA ++    YA V   +D+  L
Sbjct: 300  IQSGSIRWEPKATGWEISSADLDFVTNG--EHWPELKLAAKQQDDALYAYVS-RVDLPTL 356

Query: 346  IAAAALSDQLSPG-LRRWLALSRPQLRVSKLQLAGEQGGAVRAQGQVEELAFQPVGKSPG 404
                 L   +    L++W  L+ P+  V  ++L       + A   V +L +Q V   P 
Sbjct: 357  FPLLPLFPGVDLAVLKQWFHLA-PEGSVGPIRLYQAADQPLLASTSVTQLHWQKVEGIPN 415

Query: 405  ISGLRGHFDGDAQAIALQTAPDATLRFDWPTGFGVVHEVQLAGSIVGWRDGDGWQVATPA 464
               L        + +   + P+ T   D+   F     +Q A  + G  D     ++ P 
Sbjct: 416  TQPLDLKLQWQDETLVF-SLPEQTYTLDFGDEFSAPLVLQGA-ELTGAFDTKRATLSMPH 473

Query: 465  LRVQAKDYGANLRGGMWFQNDGTRPRISLAAQLDDAALPVARKFWIRSKMSKAAIDWLDM 524
            +++   D G +    + F    T   +SLAA +       A K++    M ++  ++LD 
Sbjct: 474  VQLANDDIGLSAALKLDFS---TAASMSLAANVAVKNAANADKYFPIKAMGESLAEYLDG 530

Query: 525  AVAGGVITGGTGLVSGDLDDWPFDNNDGRFEAFGQIRDGEIRFQPDWPAMTQVQADLRFI 584
            A+  G       L  G L  +PF++N G F+A   + + E +FQPDWPA+T +  D  F 
Sbjct: 531  AIKAGQSQNAQVLWQGALSSFPFEDNSGVFQAAFTLNNAEYQFQPDWPAVTDLSLDALFE 590

Query: 585  GNGFSL-QGSGALAGTPVAQFGAGIPNFA-TSELYVRASTQADTAQLLGMLRSSPLERRY 642
                 +    G L           IP     S L ++A    D +    +L++SPL    
Sbjct: 591  NARMDIWVNQGKLMNVVADGAHVFIPELGERSLLKIQADLVTDGSAATKVLQASPLADTV 650

Query: 643  GDTLRNLTTSGPAAVTFDLLRPLRTKGVGGHLQGTVALQGAKLADARWNLAFDQVSGQAE 702
            G+TL+ +   G  A   D+  PL  +G    ++G +      +  A+  L    V+G  +
Sbjct: 651  GETLKVVQVQGAVAGNLDISIPL-YEGEAEDIRGQIVFDNTPVFIAQPGLQLKAVTGTVQ 709

Query: 703  YRDSGFGAEHLSVQHQGRTGELALRAGGFVQDPAQAFEAR-----FGATLDAKELFD--R 755
            + +         V+ QG    L      F Q    +F  +     F   LD K  +D  R
Sbjct: 710  FANE-------VVEGQGIKSRL------FEQPLEFSFATKPEGKDFTLNLDMKSRWDLSR 756

Query: 756  APQ--MEWLRPYVHGSAPWQVGVDVPLARPGQPDVPAQLTLRSQLVGTTLDLPAPLDKPA 813
             PQ     L  +  G   W   + +     G      Q  L S LVG TL LP    KP 
Sbjct: 757  LPQELHNPLSGFYQGKVAWGGNLSMVFDEQG---YQIQANLGSDLVGATLKLPGVFAKPT 813

Query: 814  TQPLDTRVKVALPVGNGDIDVAF--------GQLVAVKASSQGTQ-TGVRVVMG-TDTVT 863
             +P     +  +   +GD   A          + +    + +GTQ +   +++G     T
Sbjct: 814  DEP-----RPLMAEFSGDQQAAILRVKLDKQAEFIGGFEAEKGTQFSYFDLLLGRLFEAT 868

Query: 864  ERPPANGLVVNGRTASLDAIDWISLARGSAEPDTPPLPG----QPAQPSEKLP-LLQVDV 918
            E P      +N    S     W+ +       D  P+      + A  S   P ++ +D 
Sbjct: 869  EVPNTELGHINIDVTSGKLAHWLPVINAFIGTDNKPVRTGILVEKANHSALFPAVVGIDA 928

Query: 919  QADKLLMIGGVFPQTRLRLRPTRDAVAVTLDGPSLAGQLTVPNADGAAVQGKLSTVRWQP 978
               K  ++G      RL   P  +            G  T+        QG         
Sbjct: 929  NIGKFDLLGQGLTDLRLSANPNDNGWRFDAKASEFEG--TIDFYPNWMTQG-------LK 979

Query: 979  VAAAPEPAAPEPGDPLAGALPEPARRAVAEFDPVSIPPLSLDIDDLRVGKMTLGAATLRS 1038
            VAA+    +PE          E      A+    ++PP+++++DD R    + G   +++
Sbjct: 980  VAASKFYFSPE-------VKSEGEADFAADQVLTNLPPVAVNVDDFRFFDKSFGKLVVQA 1032

Query: 1039 SRLTDGMQVDQLQLRSDDQNIGLTGAWRGKGEAASTRLSARVDSRNLGNLLQNLTLGGQL 1098
            S    G ++  L L + + ++   G W+ +     T LS  +++    +L   L +   +
Sbjct: 1033 SPQASGYRIQTLSLTTPEVSLQGNGIWQQQNGQNQTELSVSLNASQFHHLSDQLGINPGV 1092

Query: 1099 RGGEGQLELNA--GWQGSPTGFALGSLEGNLTVDARNGQLLEVDPGAGRVLGLLSVAQLP 1156
               E  L++NA   WQG+P  F+L +L G +  +   G L +V     R+  L S+  L 
Sbjct: 1093 --DEAPLKVNADLAWQGAPYAFSLETLNGKVKFELGKGHLSQVSDKGARIFSLFSLDSLV 1150

Query: 1157 RRLMFDFRDFFSKGLAFNKLAGEVRFGDGFARTDAIRIEGPAADIAIRGQTDLRAQTFDQ 1216
            R+L  DF D F +G+ FN   G ++  +G  +T    ++  A ++ +RG TDL  ++ + 
Sbjct: 1151 RKLSLDFSDVFGQGMYFNSFTGNLQIDNGVVKTTDTEMDAIAGNMKVRGYTDLTTESLNY 1210

Query: 1217 TVDVNPKAGNLLTVVGAVAGGPVGAAVGA-AANAVLGKPLGAIGAKTYHVTGPWKEPQVD 1275
             +   P+  + +  V  ++       +GA A   VL   +  I    + V G   EP V+
Sbjct: 1211 DIRFVPQLASSVPTVVLLSTSAWTLGLGAFALTKVLEPVIEVISEIRFRVKGTMSEPVVE 1270

Query: 1276 VVDRDARE 1283
             ++R ++E
Sbjct: 1271 ELERKSKE 1278