Pairwise Alignments

Query, 233 a.a., Chromosomal replication initiator protein DnaA from Xanthomonas campestris pv. campestris strain 8004

Subject, 236 a.a., DNA replication initiation factor (RefSeq) from Shewanella sp. ANA-3

 Score =  133 bits (335), Expect = 3e-36
 Identities = 88/227 (38%), Positives = 121/227 (53%), Gaps = 3/227 (1%)

Query: 5   QLPLALRAPSDQRLDSYIAAP--DGLIAQLQAFAAGQLSDWLYLAGPSGTGKTHLALSVC 62
           QL L +  P D+  +SY  A   D LI +L+A A GQ    +Y+ GP  +G+THL  + C
Sbjct: 8   QLSLPVYLPDDETFNSYYPAAGNDELIQKLRANAEGQGEAAIYVWGPVKSGRTHLMHAAC 67

Query: 63  AAAEQAGRSSAYLPLQAAAGRLRDALEALEGRSLVALDGVDSIAGQCEDEVALFDFHNR- 121
           A A +  R S YLPL   A      LE LE   L+ +D VD IAG    E A+FD +NR 
Sbjct: 68  AHANELDRRSFYLPLGIHASISTALLEGLEQLDLICIDDVDDIAGHPIWEEAIFDLYNRV 127

Query: 122 ARAAGITLLYTARQMPDGLALVLPDLRSRLSQCVRISLPVLDDVARAAVLRDRAQRRGLA 181
           A      L+ + R  P     +LPDL SR+   +   L  + D  + A L+ RA  RGL 
Sbjct: 128 AENKRCALVVSGRSAPADAGFLLPDLVSRMQWGLNYQLQPMADDEKLAALQRRAAMRGLQ 187

Query: 182 LDEAAIDWLLTHSERELAGLVALLDRLDRESLAAQRRVTVPFLRRVL 228
           L E    +LL    R+L  L  +LD+LD+ SL  QR++T+PF + +L
Sbjct: 188 LPEDVGRFLLNRMARDLRTLFDVLDKLDKASLVHQRKLTIPFAKEML 234