Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 255 a.a., ABC-type branched-chain amino acid transport systems, ATPase component from Pseudomonas stutzeri RCH2

 Score =  146 bits (368), Expect = 4e-40
 Identities = 84/250 (33%), Positives = 140/250 (56%), Gaps = 15/250 (6%)

Query: 1   MLVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIEL 60
           +L   GL  ++     V E GLT+   +VV ++GPNGAGKTT F  + G  +  AG I L
Sbjct: 5   ILEVRGLMMRFGGLLAVNEVGLTVHDKQVVSMIGPNGAGKTTVFNCLTGFYQPTAGEILL 64

Query: 61  DGRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLE-------LRDDLDGPGQE 113
           DG  +   P +  A+ GV    Q   +F+ ++  +N+ +          L   L  PG  
Sbjct: 65  DGTPIHGLPGHKIARQGVVRTFQNVRLFKDMTAVENLLVAQHRHLNTNFLAGLLKTPGFR 124

Query: 114 KE-------LASLLEELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGV 166
           K         A  LE++ +T VA++   +L+ G++RR EIAR +  +PR+++LDEP AG+
Sbjct: 125 KSERAAMDFAAHWLEQVNLTDVANRPAGTLAYGQQRRLEIARCMMTRPRILMLDEPAAGL 184

Query: 167 DPISVGEIQRIVIHLK-ERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNN 225
           +P    +++ ++  L+ E G+ VL+ +H+++  + I D  Y++ +G  LA G+P+ + NN
Sbjct: 185 NPKETEDLKALIAMLRDEHGVTVLLIEHDMKLVMSISDHIYVINQGTPLADGSPEQVRNN 244

Query: 226 PDVRRVYLGD 235
           PDV + YLG+
Sbjct: 245 PDVIKAYLGE 254