Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 256 a.a., sugar ABC transporter ATPase from Azospirillum brasilense Sp245

 Score =  144 bits (364), Expect = 1e-39
 Identities = 86/247 (34%), Positives = 130/247 (52%), Gaps = 14/247 (5%)

Query: 2   LVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELD 61
           LV  G+ + +     V    LT+  G + GL+GPNGAGK+T   +I GL+   AGRI L 
Sbjct: 9   LVLDGVTRAFGGVVAVDNLSLTVAPGRITGLIGPNGAGKSTVVNLITGLLRLTAGRIRLG 68

Query: 62  GRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRL-------------VLELRDDL- 107
           GRD+T       A+ G+    Q   + ++ SV DN+               +L L   L 
Sbjct: 69  GRDITEAEASEVARAGIARTFQTVRLLKEASVLDNVVAGFHRHERAGLAAGLLGLPSALA 128

Query: 108 DGPGQEKELASLLEELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVD 167
           +G    +  A++L+   +   AD    SLS G +RR E+ RALA +PR++LLDEP AG++
Sbjct: 129 EGRELRRRAAAILDRFGMAGFADLPAGSLSYGHQRRVEMMRALATEPRLLLLDEPVAGMN 188

Query: 168 PISVGEIQRIVIHLKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPD 227
            +    + RI   L   G+GVL+ +HN+R  L +C   +++  G ++A G P A+  +P 
Sbjct: 189 DVEADALGRIFAELAGSGLGVLLIEHNMRFVLSLCAEIHVIDSGRLIASGTPAAVRRDPA 248

Query: 228 VRRVYLG 234
           V   YLG
Sbjct: 249 VIAAYLG 255