Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 288 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  275 bits (703), Expect = 7e-79
 Identities = 140/238 (58%), Positives = 177/238 (74%), Gaps = 1/238 (0%)

Query: 2   LVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELD 61
           L A GL K++K+R V+++  L+++ GE VGLLGPNGAGKTTCFY + GL+  D G I LD
Sbjct: 52  LAAVGLGKRFKKRRVLRDVSLSVQRGEAVGLLGPNGAGKTTCFYCVTGLITPDEGSIYLD 111

Query: 62  GRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELASLLE 121
           G D+T  PMY RA+LG+GYLPQE S+FR LSV  N+  VLE+ +  D   + +EL +LL 
Sbjct: 112 GADVTTLPMYRRARLGIGYLPQEASIFRGLSVEQNVLGVLEVVEP-DPEIRREELETLLS 170

Query: 122 ELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRIVIHL 181
           E  I H+      +LSGGERRR EIARALA++P  +LLDEP AG+DPI+VGEI+ +V HL
Sbjct: 171 EFSIAHLRHSPAMALSGGERRRAEIARALASRPGFILLDEPLAGIDPIAVGEIRDLVAHL 230

Query: 182 KERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLGDTFRL 239
           K+RG+GVLITDHNVRETL I DRAYIL EG V+ +G P A++ +  VRRVYLGD F L
Sbjct: 231 KDRGLGVLITDHNVRETLEIVDRAYILHEGTVMMEGPPSAIVVHEGVRRVYLGDHFSL 288