Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 276 a.a., putative branched-chain amino acid transport ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  141 bits (356), Expect = 1e-38
 Identities = 73/225 (32%), Positives = 130/225 (57%), Gaps = 7/225 (3%)

Query: 12  KQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELDGRDLTAEPMY 71
           K  +++ +  + ++ GE+  ++GPNGAGK+T    + G+++  +G + LDG D+T     
Sbjct: 56  KGPDILHDCTIAVDKGEIAVIVGPNGAGKSTAMKAVFGMLDVRSGAVRLDGEDITQLTPQ 115

Query: 72  ARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDD--LDGPGQEKELASLLEELQITHVA 129
            R   G+G++PQ  ++F  ++V +N+ +   +R D   D   Q  EL  +L E +     
Sbjct: 116 DRVVKGMGFVPQTSNIFTSMTVEENLEMGAFIRTDDFSDTMEQVYELFPILREKR----- 170

Query: 130 DQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRIVIHLKERGIGVL 189
           +Q    LSGG+R++  + RAL  KP++++LDEP AGV PI + E+   +I +   G+ +L
Sbjct: 171 NQPAGELSGGQRQQVAVGRALMTKPKVLMLDEPTAGVSPIVMDELFDRIIEVARTGLPIL 230

Query: 190 ITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLG 234
           + + N ++ L I D+ Y+L +G     G    LL +P+VR+ +LG
Sbjct: 231 MVEQNAKQALEIADKGYVLVQGRNAYTGTGQELLADPEVRKSFLG 275