Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 243 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  302 bits (773), Expect = 5e-87
 Identities = 147/239 (61%), Positives = 188/239 (78%)

Query: 1   MLVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIEL 60
           +L A  L K YK R VV++  LT++ G++VGLLGPNGAGKTT FYM+VGLV++D GRI +
Sbjct: 5   ILKAENLAKSYKSRAVVQDVSLTVKTGQIVGLLGPNGAGKTTTFYMVVGLVQSDKGRIFI 64

Query: 61  DGRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELASLL 120
           D  DLT +PM+ RA+ G+GYLPQE S+FRKLSV DNI  VL+ R DL+  G+E+EL  LL
Sbjct: 65  DDDDLTLDPMHLRARKGIGYLPQEASIFRKLSVRDNIMAVLQTRSDLNNDGREEELEHLL 124

Query: 121 EELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRIVIH 180
           EE  ITH+ D  G +LSGGERRR EIARALAA P+ +LLDEPFAGVDPISV +I++I+  
Sbjct: 125 EEFHITHIRDSHGMALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKKIIEQ 184

Query: 181 LKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLGDTFRL 239
           LK RG+GVLITDHNVRETL +C++AYI++ G ++A+G P  +L+N  VR VYLG+ F+L
Sbjct: 185 LKNRGLGVLITDHNVRETLDVCEKAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQFKL 243