Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 260 a.a., ABC-type branched-chain amino acid transport systems, ATPase component from Dechlorosoma suillum PS

 Score =  149 bits (375), Expect = 7e-41
 Identities = 82/249 (32%), Positives = 138/249 (55%), Gaps = 16/249 (6%)

Query: 1   MLVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIEL 60
           +L    + K +    V+++    + AG + GL+GPNGAGKTT F +I GL+   AG+I+ 
Sbjct: 9   LLSIRNVGKHFGGLHVLQDVSFEVPAGSIYGLIGPNGAGKTTVFNLITGLLTPSAGQIDF 68

Query: 61  DGRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPG--------- 111
            G+ L     +     G+    Q   +F+++ + +N+ + +    +  G G         
Sbjct: 69  QGQTLIGLEPHRITHQGIARTFQNIRIFKEMDLLENVMVGMHDHLNYGGFGIFLNSPACR 128

Query: 112 ------QEKELASLLEELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAG 165
                 +E+ L  LL  + + H AD L  +LS G++R+ E ARALA +P+++LLDEP AG
Sbjct: 129 AAEKKARERAL-ELLSWVGLDHKADMLADNLSYGDQRKLEFARALATEPKLLLLDEPVAG 187

Query: 166 VDPISVGEIQRIVIHLKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNN 225
           ++P     +   + +++ RG GV + +H++R  +G+CDR  +L  G ++A+G PD + NN
Sbjct: 188 MNPSEKTILMEEINNIRNRGYGVFMIEHDMRFVMGLCDRIAVLNFGRIIAEGTPDEVRNN 247

Query: 226 PDVRRVYLG 234
           PDV   YLG
Sbjct: 248 PDVIEAYLG 256