Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 254 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  267 bits (683), Expect = 1e-76
 Identities = 137/233 (58%), Positives = 171/233 (73%), Gaps = 1/233 (0%)

Query: 7   LRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELDGRDLT 66
           LRK YK+R V+++  L +  GE V LLGPNG+GKTTCFY I GL+  +AG + +DGRD+T
Sbjct: 22  LRKSYKRRPVIRDVSLEVTRGEAVALLGPNGSGKTTCFYAIAGLLAPEAGIVSIDGRDVT 81

Query: 67  AEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELASLLEELQIT 126
             PMY RAKLG+GYLPQE S+FR +SV DNIR +LE+ +  D   + + L  LL E  I 
Sbjct: 82  LLPMYRRAKLGIGYLPQEMSIFRGMSVEDNIRAILEV-NTRDRTTRMERLEELLAEFNIE 140

Query: 127 HVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRIVIHLKERGI 186
           H+      +LSGGERRR EIAR LAA P+ +LLDEPFAGVDPI+VG+I+ +V  LK RGI
Sbjct: 141 HLRRTSALALSGGERRRVEIARCLAADPKYLLLDEPFAGVDPIAVGDIRALVAQLKTRGI 200

Query: 187 GVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLGDTFRL 239
           GVLITDHNVRETL I DRAYIL +G VL  G  D ++ + +VRRVYLG+TF +
Sbjct: 201 GVLITDHNVRETLEIVDRAYILHDGVVLMSGTKDEVVRDENVRRVYLGNTFTM 253