Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 261 a.a., sugar ABC transporter ATP-binding protein from Cupriavidus basilensis FW507-4G11

 Score =  283 bits (725), Expect = 2e-81
 Identities = 149/242 (61%), Positives = 182/242 (75%), Gaps = 4/242 (1%)

Query: 2   LVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELD 61
           LV   L+K+Y  R VVK+  L +++GEVVGLLGPNGAGKTT FYMIVGLV  D G I LD
Sbjct: 20  LVVRHLKKRYGSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVALDEGDIVLD 79

Query: 62  GRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELR----DDLDGPGQEKELA 117
            + ++   ++ RA++G+ YLPQE SVFRKL+V +NIR VLEL+      L     E+ L 
Sbjct: 80  DKHISGLAIHERARMGLSYLPQEASVFRKLNVQENIRAVLELQLNDGKPLSKAEIERRLD 139

Query: 118 SLLEELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRI 177
           +LL++LQI H+ D    SLSGGERRR EIARALA+ PR +LLDEPFAGVDPI+VGEIQRI
Sbjct: 140 TLLDDLQIAHLRDNPALSLSGGERRRVEIARALASAPRFILLDEPFAGVDPIAVGEIQRI 199

Query: 178 VIHLKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLGDTF 237
           V  LK R IGVLITDHNVRETLGICD AYI++EG VLA G P+ ++ N  VR+VYLG+ F
Sbjct: 200 VSFLKARNIGVLITDHNVRETLGICDHAYIISEGAVLASGQPEDIIANESVRKVYLGENF 259

Query: 238 RL 239
           R+
Sbjct: 260 RM 261