Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 261 a.a., ABC transporter from Burkholderia phytofirmans PsJN

 Score =  290 bits (741), Expect = 2e-83
 Identities = 151/243 (62%), Positives = 184/243 (75%), Gaps = 5/243 (2%)

Query: 2   LVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELD 61
           LV   L+K+Y  R VVK+  L +++GEVVGLLGPNGAGKTT FYMIVGLV  DAG I+LD
Sbjct: 19  LVVRNLKKRYGSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIDLD 78

Query: 62  GRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELAS--- 118
           G+ ++  P++ RA LG+ YLPQE SVFRKLSV +NIR VLEL+ + +G    K+  +   
Sbjct: 79  GKSISLLPIHKRASLGLSYLPQEASVFRKLSVEENIRAVLELQHEENGKRLSKDAITNRT 138

Query: 119 --LLEELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQR 176
             LL+ELQI H+ +    SLSGGERRR EIARALA  P  +LLDEPFAGVDPI+V EIQ+
Sbjct: 139 EALLDELQIAHLRENPALSLSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQK 198

Query: 177 IVIHLKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLGDT 236
           IV  LK+R IGVLITDHNVRETLGICD AYI+++G VLA GAP  ++ N  VRRVYLG+ 
Sbjct: 199 IVKFLKQRNIGVLITDHNVRETLGICDHAYIISDGSVLAAGAPSDIIENESVRRVYLGEH 258

Query: 237 FRL 239
           FR+
Sbjct: 259 FRM 261