Pairwise Alignments

Query, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

Subject, 376 a.a., sulfate ABC transporter, ATPase subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  136 bits (343), Expect = 5e-37
 Identities = 81/233 (34%), Positives = 135/233 (57%), Gaps = 9/233 (3%)

Query: 5   TGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELDGRD 64
           T + KK+ Q + +    L ++ GE++GLLGP+G+GKTT   +I GL  AD+G+I    RD
Sbjct: 6   TNISKKFGQFQALSPLNLDIQEGEMIGLLGPSGSGKTTLLRIIAGLEGADSGQIHFGNRD 65

Query: 65  LTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQ---EKELASLLE 121
           +T   +  R    VG++ Q  ++FR ++VADN+   LE+      P +   +K ++ LLE
Sbjct: 66  VTQVHVRDRR---VGFVFQNYALFRHMTVADNVAFGLEVIPKKQRPSKAEIQKRVSHLLE 122

Query: 122 ELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRIV--I 179
            +Q+ H+A +    LSGG+++R  +ARALA +P ++LLDEPF  +D     E++R +  +
Sbjct: 123 MVQLGHLAQRYPEQLSGGQKQRIALARALATQPEVLLLDEPFGALDAKVRKELRRWLRSL 182

Query: 180 HLKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVY 232
           H + +   V +T H+  E L + DR  +++ G +     P  L   P+ R V+
Sbjct: 183 HDELKFTSVFVT-HDQDEALELSDRVVVMSNGNIEQVNTPIELYAQPNSRFVF 234