Pairwise Alignments

Query, 346 a.a., Holliday junction DNA helicase RuvB from Xanthomonas campestris pv. campestris strain 8004

Subject, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

 Score =  433 bits (1113), Expect = e-126
 Identities = 211/335 (62%), Positives = 265/335 (79%), Gaps = 1/335 (0%)

Query: 3   EQRTIASSATREDEAADASIRPKRLADYLGQQPVRDQMEIYIQAAKARGEAMDHVLIFGP 62
           E   + S   RE E  DA++RP+ LAD++GQ+  R+ + +++QAA+ARGEAMDHVL  GP
Sbjct: 7   EDERLISGRRREGEV-DAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLFHGP 65

Query: 63  PGLGKTTLSHVIANELGVNLRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPVVE 122
           PGLGKTTL+ ++A ELGV  R TSGP+I KAGDLAA+LTNL+P DVLFIDEIHRL+P +E
Sbjct: 66  PGLGKTTLAQIVARELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRLNPAIE 125

Query: 123 EVLYPAMEDFQIDIMIGDGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRLEF 182
           EVLYPAMEDFQ+D++IG+GPAARS++IDLPPFTL+GATTR+GLLT PLRDRFGI  RL+F
Sbjct: 126 EVLYPAMEDFQLDLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIPLRLDF 185

Query: 183 YSPQELTRIVIRSAAILGIDCTPDGAAEIARRARGTPRIANRLLRRVRDFAQVKAAGHID 242
           Y   EL +IV R + +LG+  T +GA E+ARR+RGTPR+A RLLRRVRDFA V     +D
Sbjct: 186 YETDELVQIVTRGSRLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAGRSPVD 245

Query: 243 LAVAQAAMQMLKVDPEGFDELDRRMLRTIVDHFDGGPVGVESLAASLSEERGTLEDVIEP 302
             +A AA+  L+VD  G D +DRR L  + DH+ GGPVGV++LAA+L+EER T+EDVIEP
Sbjct: 246 AFIADAALNRLEVDGRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVEDVIEP 305

Query: 303 YLIQQGFLIRTARGRMVTPKAYLHLGLKPPRDRAP 337
           YLIQQGF+ RT RGRM+T  A+ HLGL PP +  P
Sbjct: 306 YLIQQGFIKRTPRGRMLTAIAWTHLGLTPPAETPP 340