Pairwise Alignments

Query, 588 a.a., Aspartyl-tRNA synthetase (EC 6.1.1.12) from Xanthomonas campestris pv. campestris strain 8004

Subject, 592 a.a., aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) (from data) from Phaeobacter inhibens DSM 17395

 Score =  421 bits (1083), Expect = e-122
 Identities = 237/596 (39%), Positives = 357/596 (59%), Gaps = 21/596 (3%)

Query: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPAEGDANSAEV 61
           R+H C  ++++ +G+TV L+GW    R+ GG+ FIDLRDH G+ QV  +P       + V
Sbjct: 5   RSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADP------DSPV 58

Query: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKIRTGKVEVIATRITILNKAAPLP---FHAH 116
           F     +  E  ++++G V+AR    VNDKI TG++EV    I +L K+  LP   F   
Sbjct: 59  FAEIEKVRSEWCIRIDGNVKARDESLVNDKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQ 118

Query: 117 ENPGEDTRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGA 176
           E P E+TRL+YRYLDLRR +MQ+    R  ++Q++RR +  + F + +TPI+T ++PEGA
Sbjct: 119 EYP-EETRLRYRYLDLRREKMQKNMLLRSNMIQSIRRRMWDKGFNEYQTPIITASSPEGA 177

Query: 177 RDFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQ-LEFTQL 235
           RDFLVP+R+HPG+FYALPQ+PQ FKQ++MV+GFD+Y+QIA CFRDE  RADR   +F QL
Sbjct: 178 RDFLVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQL 237

Query: 236 DMEFAFVRERDVQDFVEDMIRAIFKEV-VDVELAAQFPRMTWAEAMRRYGSDKPDLRIAL 294
           D+E +FV ++DV D ++ +++ +F+E     ++ +++P++++ +A + YG+DKPDLR  +
Sbjct: 238 DLEMSFVTQQDVFDTIQPVMQGVFEEFGKGRKVDSEWPQVSYKDAAKWYGTDKPDLRNPI 297

Query: 295 ELVDVAELVKTSEFPVFAAAANDADGRVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLA 354
           ++ D +E  + S F +FA    +    + A+  P G   SRK  D     A   G  G+ 
Sbjct: 298 KMQDCSEHFRGSGFAIFANLLENEGTEIRAIPAPKGG--SRKFCDRMNKFAQGEGLPGMG 355

Query: 355 YSKLSETG---EVSSPIAKFFGEEAFAALLAHVGAANGDIVFFGAGSYNKVSDFMGALRL 411
           Y    + G   E + P+AK  G E   A+   +G   GD  FF  G         G  R 
Sbjct: 356 YIFWRDQGEGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFESVAGRART 415

Query: 412 KAGKDFGLVAAG-WAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTAV 470
             G++ GL     +A  W+ DFP++E DEE  +    H+PF+ P    +  L ++     
Sbjct: 416 VIGEELGLTDKDRFAFCWIVDFPIYEKDEETGKIDFEHNPFSMPQ-GGMDALLSDPLAVK 474

Query: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530
              YD+  NG E+  G+IR H+P++    FE+ G G EE   +FG +++A  YGAPPHGG
Sbjct: 475 GYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGG 534

Query: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAAEQLAEVHVQVRPK 586
            A GIDR+  L+A   +IR+VI FP    A+DLM  APS   ++QL E+ ++V P+
Sbjct: 535 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAPSEPMSDQLMELGLRVIPQ 590