Pairwise Alignments

Query, 326 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

Subject, 289 a.a., AraC family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 9/260 (3%)

Query: 67  LAAVAHQSPHHFHRVYRALAGETLGQTTARLRLSQAVHLLGE-PGRSITDVALAVGYQTP 125
           L+ VA+ S  HFHR + A  G  + +    +RL +A H L      S+ D AL  G+++P
Sbjct: 34  LSRVANFSEFHFHRQFTAFVGVPVSRYVQLMRLRRAAHCLASLADHSVLDAALGAGFESP 93

Query: 126 QALARAFRALLQVSPSSLRQAPAIRAQTLQQLATPALAPHAAPAPL-QVTVQWLEPLEVV 184
           +A +RAFR    ++PS+ R+ P       Q        PH + + + QV +     + V 
Sbjct: 94  EAFSRAFRRAFGMTPSAFRKQP-----NWQVWGAVFAIPHFSRSIIMQVRIVEFSEVRVA 148

Query: 185 VLRQRGAFDDLDRGFGRIAAWAERAGVIEHLHA-LIGVPLSDHRDVPAQQHLFECGIAFA 243
            L   G    +D    +   W  ++G      +   G+P  +    P ++  F       
Sbjct: 149 ALEHCGPTGLIDESVRKFIEWRTQSGQSPVASSRTFGIPYGNPDTTPPEEFRFAMCGEIH 208

Query: 244 TAVAPPA-PLHVRVLGEGAHAVLRHTGSYAGLEDALDRLLADWLPGSGHALRDAPLHYLY 302
            AVAP    +   V+  G   V+RH GS   + + +  +  DWLP SG  LRD PL++ Y
Sbjct: 209 EAVAPNEFGVRELVIPGGRCVVVRHVGSTDHIGETIYPIYRDWLPASGEELRDHPLYFDY 268

Query: 303 LDDPETVAEADLRADIRVPV 322
           L           + DI +P+
Sbjct: 269 LSVYPETPHDQWQTDIYIPL 288