Pairwise Alignments

Query, 331 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Xanthomonas campestris pv. campestris strain 8004

Subject, 343 a.a., ribosomal large subunit pseudouridine synthase from Sinorhizobium meliloti 1021

 Score =  223 bits (568), Expect = 5e-63
 Identities = 146/327 (44%), Positives = 190/327 (58%), Gaps = 33/327 (10%)

Query: 20  DSAAGRRFDAVLAE-LFPEFSRSRLSEWIKSGDALLDGETA-RPRDTLRGGETVQVQVVL 77
           D AAGR  DA L E L  EFSR+R+   I+ G   ++G T   P+  +  G++ ++ +  
Sbjct: 19  DDAAGR-LDAFLTEALAGEFSRNRIKSLIEQGAVSINGATVTEPKRKVHPGDSFRIALPE 77

Query: 78  ETQTHAAPQDIPLNVLYEDDHVLVIDKPAGLVVHPGAGNPDGTLVNALLFRD----PNLA 133
                   + IPL+VLYED  ++V+ KPAGLVVHPGAGN  GTLVNAL+         + 
Sbjct: 78  PEDPEPKGEAIPLDVLYEDADLIVLVKPAGLVVHPGAGNWTGTLVNALIHHCGDSLSGIG 137

Query: 134 AVPRAGVVHRLDKDTSGVMVVARTLQAQTALVEQLSAR----DVHRQYLAVVVG-ALVSG 188
            V R G+VHRLDKDTSGVMVVA+   A   L +Q +       + R Y AVV G      
Sbjct: 138 GVKRPGIVHRLDKDTSGVMVVAKNDAAHRHLSDQFADHGRNGPLERAYRAVVWGRPRQLK 197

Query: 189 GTADAPIDRHPRDRLKMAVR----DDGRDAVTHYRLRERFRAH-------TALECRLETG 237
           G  DAP+ R   DR K AV+    DD R+A+THY + ER+          + +EC LETG
Sbjct: 198 GKIDAPLGR-AGDRTKRAVKREDSDDAREAITHYEVVERYHEKPDGTSLASTVECHLETG 256

Query: 238 RTHQIRVHMAHLKSPIVGDPLYGGALK-----LPKGATDTLVAELRGFKRQALHAETLEF 292
           RTHQIRVHMAH+  P++GDP YG A +     LP+ A     A +  F RQALHA  L+F
Sbjct: 257 RTHQIRVHMAHIGHPLIGDPDYGAAFRTKANLLPEPAR----AAVNRFPRQALHAFMLQF 312

Query: 293 LHPVSGEPIRASAPVPEDLQRLMSALR 319
            HP +GE +    PVP D+Q L++ALR
Sbjct: 313 EHPATGETMHFETPVPADMQELIAALR 339