Pairwise Alignments

Query, 470 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) from Xanthomonas campestris pv. campestris strain 8004

Subject, 488 a.a., UDP-N-acetylmuramate--L-alanine ligase (RefSeq) from Shewanella sp. ANA-3

 Score =  179 bits (455), Expect = 1e-49
 Identities = 137/472 (29%), Positives = 227/472 (48%), Gaps = 29/472 (6%)

Query: 13  IGDNEAMSKLHILGIAGTFMGGVAALARELGWQVEGSDQAIYPPMSTQLETLGIRLAQGY 72
           I +   + ++H +GI G  MGG+A +    G+ V GSD A    ++ +L  LG ++  G+
Sbjct: 14  IPEMRRIKRIHFVGIGGAGMGGIAEVLVNEGYVVSGSDIA-QNAVTDRLCLLGAKIHIGH 72

Query: 73  LPANISADAQDVVIGNALSRGNAAVEAVLDAGRRYSSGAQWLAEQVLPGRDTLAVAGTHG 132
              N+   A  VV+  A++  N  + A  +        A+ LAE ++  R  +A+AGTHG
Sbjct: 73  GADNVQ-QADVVVVSTAINPENPEIIAAKELRIPIVRRAEMLAE-LMRYRHGVAIAGTHG 130

Query: 133 KTTTTTILSYLLEAAGRAPGFLIGGVAEDFGVSARLGQGREFVVEADEYDTAFFDKRSKF 192
           KTTTT++++ L   AGR P F+IGG+    G +ARLG  R  + EADE D       + F
Sbjct: 131 KTTTTSLIASLYGQAGRDPTFVIGGLLNSAGTNARLGTSRYLIAEADESD-------ASF 183

Query: 193 VHYRPLVAILNNLEYDHADIF-PDVAAIQRQFHHLVRTVPARGRLIVNGEDARLAEVLAM 251
           +H +P+V+++ N+E DH D +  D   ++  F   +  +P  G  +V  +DA + E++  
Sbjct: 184 LHLQPMVSVVTNIEADHMDTYGGDFEKLKSTFVDFLHNLPFYGVAVVCIDDAVVREIMPR 243

Query: 252 GCWTPVERFGFDPALDWSAQLLADDG--SRFAVLHRGEEIGQVQWPLLGRHNVLNGLAAL 309
                +  +GF    D  A      G   RF V  +G+E   +   L G+HNVLN LAA+
Sbjct: 244 -IGRHMITYGFSDDADVQALNFHQQGHQCRFTVRRKGKEDLDLLLNLPGQHNVLNALAAI 302

Query: 310 AAVQAVGVDPVTVMPALARFQSVKRRLEVLGQ----AQGITVYDDFAHHPTAIATTLQGL 365
           A      +D   ++ ALA FQ + RR + LG+       + + DD+ HHP+ +A T++  
Sbjct: 303 AVATEDEIDDSAIIQALAEFQGIGRRFQHLGKFATPKGEVMLVDDYGHHPSEVAATIKAA 362

Query: 366 RAKVGTARVLVAMEPRSNSMRLGAHAQALAPSLHDADAVVFL------HRPELAWDAAPI 419
           RA     R+++A +P   +     + +     L   D ++ L        P    D   +
Sbjct: 363 RAGWPDKRLVMAYQPHRYTRTRDLY-EDFIEVLSQVDCLLLLEVYSAGEAPIPGADGRAL 421

Query: 420 IAQVRGQAHV----AQDVDTLLRMLGEIAQPGDHVVFMSNGGFDGAPRRFLA 467
              +R +  +        D L  +L ++ Q GD ++    G      R+  A
Sbjct: 422 CRSIRLRGQLDPIFIASPDQLAEVLPDVLQEGDLLLTQGAGNIGALSRQLAA 473