Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  139 bits (350), Expect = 1e-37
 Identities = 82/352 (23%), Positives = 177/352 (50%), Gaps = 20/352 (5%)

Query: 10  LSAVVASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESMYTKLKLLK 69
           L  V+A +    ++ L+VY W  Y+   ++  FE++ G+ + Y  F++NE++  KL L  
Sbjct: 23  LMGVMAGAVQADDKVLHVYNWSDYIAPDTVAKFEKESGIKVVYDVFDSNETLEAKL-LAG 81

Query: 70  GTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAH--DPQNKFSLPYIW 127
            +GYD+V  S  F+ K  + G+  ++D +++PN K+    +L      DP N+ + PY+W
Sbjct: 82  KSGYDIVVPSNNFLAKQIKAGVYQKLDKSKLPNWKNLNTDLLKAVSVSDPGNEHAFPYMW 141

Query: 128 GITGLYYNSSTLPNGITKWA--DLWDKQYEQQ---------VMLIDDIRDVFGMALKLNG 176
           G  G+ +N   +   +   A  + WD  ++ +         +  +D   ++  +AL   G
Sbjct: 142 GSIGIGFNPEKVKAALGADAPTNSWDLLFKPENAAKLKACGISFLDSPTEMIPVALHYLG 201

Query: 177 FSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMP 236
           +  ++++++++ +A    + ++ ++  ++S        +G   + + ++G+ YQ +    
Sbjct: 202 YPTDSQDKKQLAEAEALFLKIRPSIGYFHSSKYISDLANGNICVAVGYSGDIYQAKSRAA 261

Query: 237 E------LKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYAS 290
           E      + + +P+EGA  + D   IP  ++N+  A+KF+ F+ +PE  AEI  ++ + +
Sbjct: 262 EAGGKVKVSYNIPKEGAGSFFDMVAIPKDAENVEGAYKFMTFLQKPEIMAEITDTVSFPN 321

Query: 291 ATKGGRALLPAELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQRLRN 342
                  L+  E+  +P I+P  +   K   I D+   T  I  + W ++++
Sbjct: 322 GNAASTPLVSKEITSDPGIYPPADVQAKLYAIADLPAATQRILTRSWTKIKS 373