Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., extracellular solute-binding protein, family 1 from Pseudomonas syringae pv. syringae B728a

 Score =  154 bits (388), Expect = 4e-42
 Identities = 93/341 (27%), Positives = 171/341 (50%), Gaps = 21/341 (6%)

Query: 21  AEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESMYTKLKLLKGTGYDVVFASA 80
           AE T+++Y W  Y+ + +L  FE   G+   Y  F++NE++  KL L   TGYDVV  S 
Sbjct: 24  AESTVHIYNWSDYIGKTTLADFEATTGIKPMYDVFDSNETLEAKL-LAGRTGYDVVVPSN 82

Query: 81  YFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLA--HDPQNKFSLPYIWGITGLYYNSST 138
           +F+ K  + G   ++D + +PN K+  P +L     +DP N++++PY+WG  G+ YN   
Sbjct: 83  HFLGKQIKAGAFQKLDKSLLPNYKNLDPALLKRLEKNDPGNQYAVPYLWGTNGIGYNVEK 142

Query: 139 LP-----NGITKWADLWDKQYEQQ-----VMLIDDIRDVFGMALKLNGFSINTKNEEEIK 188
           +      + I  WA L++ +  ++     V  +D   ++    L   G   N+  E + K
Sbjct: 143 VKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSADEMLPAVLNYLGLDPNSTKEADYK 202

Query: 189 KAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPE------LKFVM 242
           +A   L+A++  V  ++S        +G+  +   ++G+ +Q +    E      L + +
Sbjct: 203 EAEAKLMAIRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSI 262

Query: 243 PEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAE 302
           P+EG  LW D   IP+ SKNI  A  FIN+M  P   A++   +GYA+        +  +
Sbjct: 263 PKEGGNLWFDMLAIPADSKNIKQASAFINYMLDPRVIAKVSDEVGYANPNPASGEFMDQK 322

Query: 303 LRDNPTIFPSDEDMKKGEFINDVGP-ETLAIYEKYWQRLRN 342
           +R +  ++P  E + +  F+N   P +   +  + W ++++
Sbjct: 323 IRTDAAVYPPQEVLDR-LFVNSELPLKVQRLMTRSWTKVKS 362