Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  131 bits (329), Expect = 3e-35
 Identities = 88/323 (27%), Positives = 157/323 (48%), Gaps = 15/323 (4%)

Query: 7   GLVLSAVVASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESMYTKLK 66
           GL  SA  A+  +  +  +++  W  Y    + +AF    GV +  + F +NE M  KL+
Sbjct: 51  GLFNSAAYAAGDLGTQ--MSIATWPNYHDPATFEAFTAATGVAVEVNVFGSNEEMLAKLQ 108

Query: 67  LLKGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNM----KDAMPTVLGLAHDPQNKFS 122
              G G+D+   + Y I    + GL+ E+D +++PN     ++A  T  G+       ++
Sbjct: 109 A-GGIGWDLFVPTNYTISTYVKLGLIDELDLSKLPNYDASTENARFTNEGIVEG--KTYA 165

Query: 123 LPYIWGITGLYYNSSTLPNGITKWADLWD---KQYEQQVMLIDDIRDVFGMALKLNGFSI 179
           +P  WG TG+  NS  +   +  W D ++    + + + M+ D      G AL   GFS 
Sbjct: 166 VPKNWGTTGIAVNSDKIKAPVASWKDFFEIAMTEADGRAMVHDYQLTTIGNALVSLGFSF 225

Query: 180 NTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSG-EATLGMQWNGNAYQGQVEMPEL 238
           N+   EE+ KA E L+ +K ++   NSD  + P +   +A + M W  +  Q   +MPE+
Sbjct: 226 NSIKPEELAKAEELLIKVKPHLYAINSD--YQPSMRATDAWMTMCWTNDGAQLNRDMPEI 283

Query: 239 KFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRAL 298
           KFV+ ++G  +W D + IP  + N P  +  ++++  P N  +   + G  +       L
Sbjct: 284 KFVLGKDGGEIWSDFYAIPKSAANKPAGYALLDYLMTPANAVKEHIANGAPTTDSRVMKL 343

Query: 299 LPAELRDNPTIFPSDEDMKKGEF 321
           LPA++  N  ++P +  +   EF
Sbjct: 344 LPADVTSNKIVYPDEAALTPLEF 366