Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., putrescine-binding periplasmic protein from Sinorhizobium meliloti 1021

 Score =  169 bits (428), Expect = 1e-46
 Identities = 98/361 (27%), Positives = 190/361 (52%), Gaps = 22/361 (6%)

Query: 1   MKTFIKGLVLSAVVASSQVYA---EQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFEN 57
           M   I   + +AV+A S + A   E+ +NVY W  Y+ +  L+ F ++ G+ + Y  F++
Sbjct: 1   MSKLIVATLTTAVLAGSTILAFAQERVVNVYNWSDYIDDSILEEFTKETGIKVVYDVFDS 60

Query: 58  NESMYTKLKLLKGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLA--H 115
           NE + TKL L  G+GYDVV  +AYF+++    G+  ++D +++PN+ +    V+     +
Sbjct: 61  NEILETKL-LAGGSGYDVVVPTAYFLQRQIAAGVFQKLDKSKLPNISNMWDMVMERTAQY 119

Query: 116 DPQNKFSLPYIWGITGLYYNSSTLPNGI-TKWADLWDKQYEQQVM---------LIDDIR 165
           DP N++++ Y+WG TG+ YN   +   + T     WD  ++ ++          L+D   
Sbjct: 120 DPGNEYAVDYMWGTTGIGYNVEKMKEILGTDEKPNWDVIFDPEIAAKFKDCGIHLLDSPT 179

Query: 166 DVFGMALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWN 225
           D+   AL   G + ++ ++ +++KA + L+ ++ N+  ++S        +G+  L + ++
Sbjct: 180 DIMPSALAYLGLNPDSHDQADLEKAADLLMKVRPNIRKFHSSEYINALANGDICLAVGFS 239

Query: 226 GNAYQGQVEMPELK------FVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQ 279
           G+ +Q +    E K      + +PE+GA +W D   IP+ + ++  AH+FIN+M +PE  
Sbjct: 240 GDVFQARDRAAEAKAGVTVDYSIPEQGAQMWFDMLAIPADAPHVAEAHEFINYMMKPEVI 299

Query: 280 AEIVQSLGYASATKGGRALLPAELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQR 339
           A+    + YA+  K  +  L  E+ ++  I+PSD  M+K         +   +  + W R
Sbjct: 300 AKASNYVFYANGNKASQQFLDKEVLEDTAIYPSDAVMQKLFTTTPFEAKEQRVLTRLWTR 359

Query: 340 L 340
           +
Sbjct: 360 I 360