Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., polyamine ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score =  164 bits (416), Expect = 3e-45
 Identities = 98/354 (27%), Positives = 182/354 (51%), Gaps = 20/354 (5%)

Query: 7   GLVLSAVVASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESMYTKLK 66
           G+ LS  +       ++T+N Y W  Y+    ++ F ++ G+ + Y TF+ NE++ TKL 
Sbjct: 16  GIALSVSLTLPGWAQDRTVNFYNWSNYVAPGVIEDFTRETGIKVVYDTFDANETLETKL- 74

Query: 67  LLKGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLG--LAHDPQNKFSLP 124
           L   +GYDVV  +AYF+++    G+  ++D +++PN+K+A   V      +DP N+F++ 
Sbjct: 75  LAGKSGYDVVVPTAYFLQRQITAGVFQKLDKSKLPNLKNAWDFVTDRLALYDPGNQFAVN 134

Query: 125 YIWGITGLYYNSSTLPNGITKWA--DLWDKQYEQQ---------VMLIDDIRDVFGMALK 173
           Y+WG TG+ YN +     + + A  D W+  ++ +         V ++D   D+   AL 
Sbjct: 135 YMWGTTGIGYNVAAAKRILGEGAVIDSWEMIFKPENLAKFKECGVHMLDSADDILPAALT 194

Query: 174 LNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQV 233
             G   N+ N+++++KA E +  ++ +V  ++S        +GE  L + W+G+  Q Q 
Sbjct: 195 YLGRDPNSTNKDDLEKAAEVVGKVQPSVRKFHSSEYLNALATGEICLVVAWSGDIKQAQS 254

Query: 234 EMPE------LKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLG 287
              E      + + +P+EGA ++ DN  IP+ +KN+  AH+ INF+Y+P+  A     L 
Sbjct: 255 RAAEAHNGVEIGYAIPKEGAQMFFDNLAIPADAKNVAEAHELINFLYRPDIAARNSDFLS 314

Query: 288 YASATKGGRALLPAELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQRLR 341
           YA+  K  +  +   + ++  I+P      +   I    P T     + W R++
Sbjct: 315 YANGNKTSQDFINPRVLNDKAIYPDAATQGRLFVITARDPATQRTINRLWTRVK 368