Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., putrescine ABC transporter, periplasmic putrescine-binding protein from Marinobacter adhaerens HP15

 Score =  166 bits (420), Expect = 9e-46
 Identities = 98/368 (26%), Positives = 183/368 (49%), Gaps = 28/368 (7%)

Query: 1   MKTFIKGLVLSAVVA----SSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFE 56
           M    K   L+A VA    +S  +A + + VY W  Y+ E +L  F ++ G+ + Y  ++
Sbjct: 1   MLKLCKPQALAASVALSLCASSAFAAEEVRVYNWSDYIAEDTLAKFTEETGIKVIYDVYD 60

Query: 57  NNESMYTKLKLLKG-TGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAH 115
           +NE +  +  LL G +GYD+V  S +++ K         +DH+++PNM +  P ++    
Sbjct: 61  SNEIL--EAALLSGRSGYDLVVPSNHYVAKQISANAFVALDHSKLPNMSNLNPDLMDDLE 118

Query: 116 --DPQNKFSLPYIWGITGLYYNSSTLPN--GITKWADLWDKQYEQQVM-----------L 160
             DP ++F+LPY+WG  G  YN   +    G +   D W   ++ +V            +
Sbjct: 119 KVDPGSQFALPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLATGGCGIAM 178

Query: 161 IDDIRDVFGMALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATL 220
           +D   ++   A+   G   N+ N ++IKK  E + A++ N+  ++S        +G+  +
Sbjct: 179 LDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAIRPNITYFHSSRYIGDLANGDLCV 238

Query: 221 GMQWNGNAYQGQVEMPE------LKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMY 274
              ++G+  Q      E      +++ +P+EGAVLW D  TIP+G+ N+  AHK +NF+ 
Sbjct: 239 AAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGAPNVENAHKLMNFLM 298

Query: 275 QPENQAEIVQSLGYASATKGGRALLPAELRDNPTIFPSDEDMKKGEFINDVGPETLAIYE 334
           +PE  A++   + YA+  K     +  E+  + +I+P+DE MKK   +     +   +  
Sbjct: 299 RPEIIADVTNYVWYANPNKPANEFVDPEILSDTSIYPTDEVMKKLYIMEGRPQDAQRLMT 358

Query: 335 KYWQRLRN 342
           + W  +++
Sbjct: 359 RTWTNVKS 366