Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Klebsiella michiganensis M5al

 Score =  166 bits (419), Expect = 1e-45
 Identities = 104/364 (28%), Positives = 187/364 (51%), Gaps = 24/364 (6%)

Query: 2   KTFIKGLV---LSAVVASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENN 58
           K ++ GLV   L AV A S    ++TL+VY W  Y+   ++  FE++ G+ + Y  F++N
Sbjct: 6   KKWLTGLVTGALMAVSAGSLAAEQKTLHVYNWSDYIAPDTVANFEKETGIKVVYDVFDSN 65

Query: 59  ESMYTKLKLLKGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLA--HD 116
           E +  KL +   TG+D+V  SA F+E+    G+   +D +++PN K+  P VL L   HD
Sbjct: 66  EVLEGKL-MAGSTGFDLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKHD 124

Query: 117 PQNKFSLPYIWGITGLYYNSSTLPNGITKWA--DLWDKQYEQQ---------VMLIDDIR 165
           P NK+++PY+W  TG+ YN   +   + K A  D WD   + +         V  +D   
Sbjct: 125 PDNKYAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDAPE 184

Query: 166 DVFGMALKLNGFSINT-KNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQW 224
           ++F   L   G   N+ K ++    A + L+ L+ N+  ++S        +G+  + + W
Sbjct: 185 EIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGW 244

Query: 225 NGNAYQGQVEMPELK------FVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPEN 278
            G+ +Q      E K      + +P+EGA+ + D F +P+ +KN   A++F+N++ +P+ 
Sbjct: 245 AGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDV 304

Query: 279 QAEIVQSLGYASATKGGRALLPAELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQ 338
            A I   + YA+  K    L+  E+R+NP I+P  +   K   +    P+   +  + W 
Sbjct: 305 IAHISDHVYYANGNKASLPLVSEEIRNNPAIYPPADVFAKLFTLKVQDPKIDRVRTRAWT 364

Query: 339 RLRN 342
           ++++
Sbjct: 365 KVKS 368