Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., polyamine ABC transporter, periplasmic polyamine-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  272 bits (695), Expect = 1e-77
 Identities = 137/342 (40%), Positives = 214/342 (62%), Gaps = 5/342 (1%)

Query: 1   MKTFIKGLVLSAVVASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNES 60
           + T +  L+ + V  S++    + LNV+ W  Y+P+  L  F ++ G+ + Y+T+E+NE+
Sbjct: 5   LATVVMLLLWTGVAVSAE---PKVLNVFNWSEYVPQTVLDRFTKETGIKVVYTTYESNEA 61

Query: 61  MYTKLKLLKGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAHDPQNK 120
           MY K+KLL+G GYD+V  S YFI+ M ++GLLA+ID  ++ N  +  P VL    DPQN+
Sbjct: 62  MYAKIKLLRGKGYDIVVPSTYFIDMMRKDGLLAKIDRAKLTNYANLDPRVLHQPFDPQNE 121

Query: 121 FSLPYIWGITGLYYNSSTL-PNGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSI 179
           FS+PY+WG TGL  N   + P  I+ W DL+  +++  V+L DD+RD FG+ALK  G+S+
Sbjct: 122 FSVPYMWGNTGLMVNRKVVDPATISSWNDLFRPEFKGGVILSDDLRDTFGIALKALGYSV 181

Query: 180 NTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELK 239
           N+ +E EIK AYE L+ LK +V +++  A    +++ E   GM WNG+A+    E P+L 
Sbjct: 182 NSTSEAEIKAAYEWLLKLKPSVRVFDVTATKQAFIAEEVKGGMSWNGDAFIAMNENPDLA 241

Query: 240 FVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALL 299
           FV P+EG  LW+D+  IP G+++   AHKFI+F+ +P+     V+   Y++     + +L
Sbjct: 242 FVYPKEGLPLWVDSLAIPIGAEHKDNAHKFIDFLLRPDIAKLCVEEYNYSTPNLAAQKIL 301

Query: 300 PAELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQRLR 341
            A    +    P+D D+K  EF N VG + L +YEKYW+ L+
Sbjct: 302 DARHAQSRATSPTDADLKNSEFTNGVG-KALDVYEKYWEMLK 342