Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., spermidine/putrescine-binding protein from Caulobacter crescentus NA1000

 Score =  195 bits (495), Expect = 2e-54
 Identities = 108/321 (33%), Positives = 175/321 (54%), Gaps = 2/321 (0%)

Query: 22  EQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESMYTKLKLLKGTGYDVVFASAY 81
           E  LN Y W  Y+ E +L  F++  G+ +N S F  N+ ++ KLK     G+DVV  S  
Sbjct: 47  EAKLNFYNWDTYIGETTLGDFKKATGIDVNMSLFATNDELFAKLKA-GNPGFDVVVPSNE 105

Query: 82  FIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAHDPQNKFSLPYIWGITGLYYNSSTLPN 141
           F+ +M + GLL  +DH +IPNMK+  P+ L    DP  KFS+PY W + G+ Y  S +  
Sbjct: 106 FVTRMSQGGLLEPLDHAKIPNMKNIDPSFLNPEFDPGRKFSMPYTWLLLGIGYRKSKVKG 165

Query: 142 GITKWADLWDK-QYEQQVMLIDDIRDVFGMALKLNGFSINTKNEEEIKKAYESLVALKKN 200
               W  L+D  QY+ ++ L+ +  D+  ++ K  G S+N   ++ + K  + L+  K  
Sbjct: 166 VPDSWKWLFDSDQYKGRIALLSESADLVRLSAKYLGHSVNNIPQDMLPKIEQMLIKQKPF 225

Query: 201 VLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS 260
           V  ++ D      +SGE  L +++NG+  Q   E P+L FV+P+EG+++  D   IP G+
Sbjct: 226 VKAFHDDNGQDMLMSGEVDLVLEYNGDIAQAMKEDPDLDFVVPKEGSLINSDTLCIPKGA 285

Query: 261 KNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAELRDNPTIFPSDEDMKKGE 320
                AH FIN++   +  AEI +++ Y +     +AL+P + ++NP IFP  + M K E
Sbjct: 286 PRPNNAHAFINYLLDAQAGAEISKTILYPTPNAAAKALMPEDYKNNPVIFPPADVMAKCE 345

Query: 321 FINDVGPETLAIYEKYWQRLR 341
           +    G E  + YE+   R+R
Sbjct: 346 YGAFEGAEKASQYEELITRVR 366