Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  139 bits (350), Expect = 1e-37
 Identities = 82/338 (24%), Positives = 163/338 (48%), Gaps = 20/338 (5%)

Query: 23  QTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESMYTKLKLLKGTGYDVVFASAYF 82
           + LNVY W   + E ++  F+++ G+   Y  ++ ++++  KL L   +GYDVV  S+ +
Sbjct: 30  EELNVYNWSDNIAEDTVSGFQKETGIHTRYDVYDGDDTLQAKL-LSGSSGYDVVVPSSAY 88

Query: 83  IEKMGREGLLAEIDHNQIPNMKDAMPTVLGL--AHDPQNKFSLPYIWGITGLYYNSSTLP 140
             +    G+  ++D ++IPN+ +  P ++ +  + DP N++++P+ WG  G+ YN + + 
Sbjct: 89  AARQIEAGVYRKLDKSKIPNLANLDPVLMKMLASADPGNQYTVPWSWGTDGIGYNVTKVT 148

Query: 141 NGITKWA--DLWDKQYEQQ---------VMLIDDIRDVFGMALKLNGFSINTKNEEEIKK 189
             + K A  D WD  ++ Q         V ++D   D F + L       N+ N  + + 
Sbjct: 149 QILGKDAPYDSWDLLFDPQYVSKLKTCGVSVLDSPEDAFSVGLIYLHKDPNSTNPADYQA 208

Query: 190 AYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPE------LKFVMP 243
            Y+    ++  +  +NS        + +  L + W+G+A   +    E      +++V+P
Sbjct: 209 VYKLFKTIRSYITQFNSSGYINDLANNDVCLALAWSGDAGIAKRRAEEAHRAYEIRYVIP 268

Query: 244 EEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAEL 303
           +   VLW D   +P  + +   A ++IN++ QP+  A I   + Y +A    RA +   +
Sbjct: 269 KGDGVLWFDLMGVPKDAPHPEAAMQWINYILQPKVSAAITNQVYYPNANAAARAYVKPAI 328

Query: 304 RDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQRLR 341
            DN  ++P  E MK       +  E L +  + W +L+
Sbjct: 329 LDNEAVYPRGEKMKSLTLSLPLPAEILRLQNRLWTQLK 366