Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  142 bits (359), Expect = 1e-38
 Identities = 82/350 (23%), Positives = 170/350 (48%), Gaps = 20/350 (5%)

Query: 11  SAVVASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESMYTKLKLLKG 70
           +A+  +  + A+  LNVY W  Y+ + ++  FE+Q+G+ + Y  +++++++  KL L   
Sbjct: 22  AALSVTPALAADTELNVYNWSDYIAKDTISNFEKQDGIKVKYDNYDSDDTLQAKL-LAGS 80

Query: 71  TGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAHD--PQNKFSLPYIWG 128
           +GYD+V  ++ ++ K  + G+  ++D +++PN+ +  P ++ +  D  P N++ +P+ +G
Sbjct: 81  SGYDIVVPTSNYMAKQIQAGVYQKLDKSKLPNLANLDPVLMKMIADADPGNQYGVPWAYG 140

Query: 129 ITGLYYNSSTLPNG------ITKWADLWDKQYEQQ-----VMLIDDIRDVFGMALKLNGF 177
             G+ YN   +         +  WA ++D     +     V ++D   DVF   L+    
Sbjct: 141 TDGIGYNVQAVQKALGANAPVDSWALVFDPANLSKLKGCGVSILDQAVDVFAATLQYMHK 200

Query: 178 SINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPE 237
             N+ N  + + AYE L  ++  +  +NS        + +  +   W+G+         E
Sbjct: 201 DPNSTNPADYQAAYEVLKKIRPYITQFNSSGYINDLANNDVCVAFGWSGDVGIASRRTEE 260

Query: 238 ------LKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASA 291
                 +KF   +EG +LW D   IP  + +   A K+IN++  P+  A I   + Y +A
Sbjct: 261 AKRSYQIKFSNVKEGGLLWFDVMVIPKDAPHPEAALKWINYISDPKVNAAITNEVFYPTA 320

Query: 292 TKGGRALLPAELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQRLR 341
            K  R  +   +  + T++P DE + K   +  +  + L +  + W +L+
Sbjct: 321 NKAARQFVTPAVAQDKTVYPGDEVLSKMTLMKPMPTDILRLENRLWAQLK 370