Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

 Score =  171 bits (432), Expect = 7e-47
 Identities = 138/470 (29%), Positives = 220/470 (46%), Gaps = 58/470 (12%)

Query: 33  LNYSQLLERVDLIANQLQRLSAN---CIALRAQNSVDWVALDLAAMWSHIVMVPVPTFFT 89
           L Y+Q+LE    +   + R   +    I +  +NS DWV  D A +      +P+P  F+
Sbjct: 35  LTYTQVLEHARQLGQHMNRQFTDEKRTIGIVMRNSSDWVIADFACLLFGFTSLPLPLGFS 94

Query: 90  SEQVAHLLNEANVELCLGDWPELGSPSLTVGGFDAWHYQGNKPR--------NRPNRVLA 141
             Q  HL  E +  L      + G  +L       W    N  R          P  V  
Sbjct: 95  KYQAEHLAFECSGFLV----DDKGRETLE----KRWEIDLNASRLIHVPSALETPAPVPT 146

Query: 142 G-----------TQKITFTSGSTGTPKGVCLSEENLERVTLAIAEQMSAQVEQ-HLVMLP 189
           G           T K+  TSG+T  PKGV  S   L  V  ++   + A  ++ +L ++P
Sbjct: 147 GPSFIDSADAEWTCKVIHTSGTTSKPKGVKQSLGGLSAVLQSLLGVVPASYQKRYLSVVP 206

Query: 190 LATLLENITGIYVPLLLGVTSSVLFGESVGLSGSSQFSPTQFANVLSVYQPSSLVLTPAL 249
           L+ L+E +T +Y+PLL G T   L  E   L G + +  +     L   + S++ + P +
Sbjct: 207 LSLLIEQVTAVYLPLLSGGTVYFL-DERTPLIGEAGYDTSAILAQLLKTRASAVTVPPIM 265

Query: 250 LMALIQVVKQAPE-----LAKSLQWVAVGGARVAAELIHSARALGIPAYEGYGLSECASV 304
           L  L++V +Q  +     L ++  ++  GGA +++E +    A GI  ++GYGLSE  SV
Sbjct: 266 LDVLLEVAEQNTDTELLSLLRNELYITAGGAPISSEKLQRLSAQGIQVHQGYGLSENGSV 325

Query: 305 VSMNTPQHDQPGSCGKPLSHLQIQLAEDGELWVRGNSAL-GYIG-EP-----LTDEWLAT 357
           VS+NTP + + GS GKPL H+Q+++ +   + ++ +S   GY   +P       D WL T
Sbjct: 326 VSVNTPANSKLGSVGKPLPHVQVRVTDQQRVEIKSSSMFQGYSWVDPSACSFTEDGWLRT 385

Query: 358 GDLATLDEQGFLCIVGRKKNLIITPFGRNIAPEWIESH--AQVWLPQCRFVVVGDDEVGL 415
           GD+   D++GFL I GR+KN+I  P GRN++PE IE     Q  +      +  D ++ +
Sbjct: 386 GDIGEFDDEGFLFITGREKNIICLPNGRNVSPEQIELEFKEQTGVNDALMFMTTDGQLAI 445

Query: 416 VAVIDRLMPD------LEQRVQQIN------HQLPDYAQIQQLLFVNQPS 453
           V  I  L          +QR  ++          PD  Q+Q L  +N P+
Sbjct: 446 VLSIGPLFDHQHTQDWAQQRFSEVELPQAIWPLAPDAPQLQSLYALNGPA 495