Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., Long-chain acyl-CoA synthetases (AMP-forming) from Pseudomonas stutzeri RCH2

 Score =  305 bits (781), Expect = 2e-87
 Identities = 188/455 (41%), Positives = 263/455 (57%), Gaps = 21/455 (4%)

Query: 33  LNYSQLLERVDLIANQLQRLSANCIALRAQNSVDWVALDLAAMWSHIVMVPVPTFFTSEQ 92
           L+Y++L   V   A QL++L    +AL   N ++W   DLA + + +V VP+P FF++ Q
Sbjct: 27  LSYAELRHEVATRACQLEQLGVQRVALALDNGLEWALWDLALLRAKLVCVPLPAFFSAAQ 86

Query: 93  VAHLLNEANVELCLGDWPELGSPSLTVGGFDAWHYQGNKPRNRPNRVLAGTQKITFTSGS 152
             H+L  A ++ CL   P   S        +A           P  V  GT KIT+TSG+
Sbjct: 87  QEHVLQHAGID-CLIGGPSALSERCGFQPGEAGLLLRQLETVTP--VPPGTLKITYTSGT 143

Query: 153 TGTPKGVCLSEENLERVTLAIAEQM-----SAQVEQHLVMLPLATLLENITGIYVPLLLG 207
           TG PKGVCL  E      LA+AE +     +  V+QHL +LPLATLLENI G+Y PLL G
Sbjct: 144 TGQPKGVCLDAE----AQLAVAESLRQASLACDVQQHLCVLPLATLLENIAGLYAPLLAG 199

Query: 208 VTSSVLFGESVGLSGSSQFSPTQFANVLSVYQPSSLVLTPALLMALIQVVKQAPELAKSL 267
               +     +G SG++ F    F   L+  +P SL+L P LL+AL+   +Q   L  SL
Sbjct: 200 ARIDLRPLAEIGFSGAAGFELPCFVTTLNENRPHSLILLPQLLLALVSAAEQGVPLPTSL 259

Query: 268 QWVAVGGARVAAELIHSARALGIPAYEGYGLSECASVVSMNTPQHDQPGSCGKPLSHLQI 327
           +++AVGG RVA +L+  A  LG+P +EGYGLSECASVV +NTP+    G+ G+PL+H+ +
Sbjct: 260 RFIAVGGGRVAPQLLERAERLGLPVFEGYGLSECASVVCLNTPEARCIGTVGRPLAHVGL 319

Query: 328 QLAEDGELWVRGNSALGYIGE-PLTDEWLATGDLATLDEQGFLCIVGRKKNLIITPFGRN 386
           +LA+DGE+ V+G   LGY+GE P   EWLATGDL    E GFL + GRKK+  +T +GRN
Sbjct: 320 RLADDGEVLVKGPRMLGYLGEPPQAGEWLATGDLGHF-EDGFLILHGRKKHQFVTAYGRN 378

Query: 387 IAPEWIESHAQVWLPQCRFVVVGDDEVGLVAVIDRLMP-----DLEQRVQQINHQLPDYA 441
           + PEW+E+      P  +  + G+     VAV+    P     DL+  + ++N  LPDYA
Sbjct: 379 VNPEWVEAELVQQAPIAQAWLHGEALPQNVAVLVPRHPELSDADLQAAIDRVNAGLPDYA 438

Query: 442 QIQQLLFVNQP-SAWQAWLTANGRPKR-ALIENAQ 474
           ++   L  + P +A     TANGR +R ALI   Q
Sbjct: 439 RVHHWLRADAPFTAGNGLATANGRLRRNALINRYQ 473