Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  125 bits (313), Expect = 6e-33
 Identities = 119/442 (26%), Positives = 182/442 (41%), Gaps = 80/442 (18%)

Query: 57  IALRAQNSVDWVALDLAAMWSHIVMVPVPTFFTSEQVAHLLNEANVELCLGDWPELGS-- 114
           + L ++N  DW   DLA + +  + VP     T     H+L+     + +   P +    
Sbjct: 72  VVLASENRPDWTIADLAILAAGAIPVPAYATHTEADHLHVLDNVEAAMAIVSTPLVAERF 131

Query: 115 ----------PSLTVGGFD------------AWHYQGNKPRNRPNRVLA------GTQKI 146
                     P + +  FD            AW+    +   R    +           I
Sbjct: 132 LRAAARAKRRPLVVMMDFDDAVVVPAGLTVLAWNAMMAEGEGRGVPAVVHRIQTDDLASI 191

Query: 147 TFTSGSTGTPKGVCLSEENLERV---TLAIAEQMSAQVEQHLVMLPLATLLENITGIYVP 203
             TSG+ GTPKGV L+  ++         + E +  + E  L  LPL    E+ TG++ P
Sbjct: 192 IHTSGTGGTPKGVMLAHRSILHNCHGAFKLLETIGLEEEVFLSFLPLCHSYEHTTGLFFP 251

Query: 204 LLLGVTSSVLFGESVGLSGSSQFSPTQFANVLSVYQ------------------------ 239
           + LG       G     +   +  PT    V  +Y+                        
Sbjct: 252 ISLGAQVYFAEGAETLAANMVEAKPTIMTAVPRLYEMMRARILRAVEKEGGLKEKMFREA 311

Query: 240 ----------PSSL----VLTPALLMALIQVVKQAPELAKSLQWVAVGGARVAAELIHSA 285
                     P+SL     LT A L  L++   +A      L+ +  GG  +  ++ +  
Sbjct: 312 VDLGRRRMDDPASLGVKDKLTDAALDKLVRHAVKA-RFGGRLKAMISGGGPLNPDVGYFF 370

Query: 286 RALGIPAYEGYGLSECASVVSMNTPQHDQPGSCGKPLSHLQIQLAEDGELWVRGNSAL-G 344
           RALGIP  +GYGL+E A VVS N P+  +  + G  L  + I++A DGE+ V+G   + G
Sbjct: 371 RALGIPVLQGYGLTETAPVVSCNMPKKVKMNTVGPALYGVDIRIASDGEILVKGPLVMDG 430

Query: 345 YIGEPLT-------DEWLATGDLATLDEQGFLCIVGRKKNLIITPFGRNIAPEWIESHAQ 397
           Y  +P +       D WL TGD+ TLDE GF+ I  RKK+LI+   G NI+P+ +E    
Sbjct: 431 YWNDPESTRAVLDPDGWLHTGDVGTLDEDGFIQITDRKKDLIVNSGGHNISPQRVEGILG 490

Query: 398 VWLPQCRFVVVGDDEVGLVAVI 419
           +       VV GD    LVA+I
Sbjct: 491 LEPEIGVGVVFGDRMPHLVALI 512