Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., long-chain-fatty-acid--CoA ligase FadD from Rahnella sp. WP5

 Score = 87.8 bits (216), Expect = 9e-22
 Identities = 85/272 (31%), Positives = 123/272 (45%), Gaps = 35/272 (12%)

Query: 146 ITFTSGSTGTPKGVCLS----EENLERVTLAIAEQMSAQVEQHLVMLPLATLLENITGIY 201
           + +T G+TG  KG  L+    + NLE+   A A  +    E  +  LPL  +        
Sbjct: 211 LQYTGGTTGVAKGAMLTHRNMQANLEQAKAAYAPLLQPGHELVVTALPLYHIFALTVNCL 270

Query: 202 VPLLLGVTSSVLFGESVGLSGSSQFSPTQFANVLSVYQPSSLVLTPALLMALIQVVKQAP 261
           + L LG   S+L      + G            L  Y  +++     L  AL+   +   
Sbjct: 271 LFLELG-GKSLLITNPRDVPG--------MVKELGKYPFTAISGVNTLFNALLNN-EDFR 320

Query: 262 ELAKSLQWVAVGGARVAAELIHSA--RALGIPAYEGYGLSECASVVSMNTPQ-HDQPGSC 318
           EL  S   ++VGG     + +     +  G    EGYGL+EC+ +VS N        GS 
Sbjct: 321 ELDFSSLRLSVGGGMSVQKSVAEKWEKLTGKHLLEGYGLTECSPLVSGNPYDLKHYSGSI 380

Query: 319 GKPLSHLQIQLAED----------GELWVRGNSA-LGYIGEP------LTDEWLATGDLA 361
           G P+   +++L +D          GELWV+G    LGY   P      L D WL+TGD+ 
Sbjct: 381 GLPVPSTEVRLVDDNGKDVGPGQPGELWVKGPQVMLGYWQRPSATDEVLKDGWLSTGDIV 440

Query: 362 TLDEQGFLCIVGRKKNLIITPFGRNIAPEWIE 393
           T+DEQGFL IV RKK++I+   G N+ P  IE
Sbjct: 441 TVDEQGFLRIVDRKKDMILVS-GFNVYPNEIE 471