Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., cyclohexanecarboxylate-CoA ligase from Rhodopseudomonas palustris CGA009

 Score = 81.3 bits (199), Expect = 8e-20
 Identities = 109/463 (23%), Positives = 193/463 (41%), Gaps = 79/463 (17%)

Query: 14  HQPQKMAFVGHNAQQERIA-LNYSQLLERVDLIANQLQRLSA---NCIALRAQNSVDWVA 69
           H P K+A          +   +Y +L    D +A  L RL     + +A++  N   +  
Sbjct: 36  HCPDKVALTAVRLDGGAVRRFSYRELATLADRVAVGLNRLGVGRGDVVAMQLPNWWQFTV 95

Query: 70  LDLAAMWSHIVMVPVPTFFTSEQVAHLLNEANVELCL------------------GDWPE 111
           L LA      V+ P+   F   +++ +L   + ++ +                   D P 
Sbjct: 96  LYLACSRIGAVLNPLMPIFRERELSFMLKHGDAKVLVVPKSFRGFDHEAMARSLQPDLPA 155

Query: 112 LGSPSLTVGG----FDA------WH--------YQGNKPRNRPNRVLAGTQKITFTSGST 153
           L +  +  GG    FD       W          QG++P   P+ +     ++ +TSG+T
Sbjct: 156 LRTIVVVDGGGADDFDTLLTTPEWEKQPDAAAILQGSRPS--PDDIT----QLIYTSGTT 209

Query: 154 GTPKGVCLSEENLERVTLAIAEQMSAQVEQHLVML-PLATLLENITGIYVPLLLGVTSSV 212
           G PKGV  S   L    +  A++++ +    ++M  P+A     + G+ +P++L   S+V
Sbjct: 210 GEPKGVMHSANTLMANIVPYAQRLALRESDVILMASPMAHQTGFMYGLMMPIMLRA-SAV 268

Query: 213 LFGESVGLSGSSQFSPTQFANVLSVYQPSSLVLTPALLMALIQVVKQAPELAKSLQWVAV 272
           L            + PT+ A ++   + +  + +   L  L +VVK++ E   SL+    
Sbjct: 269 L---------QDIWEPTKAAELIRTERVTFTMASTPFLTDLTRVVKESGEPVPSLKTFLC 319

Query: 273 GGARVAAELIHSARA-LGIPAYEGYGLSECASVVSMNTPQHDQPGSC--GKPLSHLQIQL 329
            GA +   L+  A+A LG      +G++E  +V  +     D+  S   G PL  +++++
Sbjct: 320 AGAPIPGPLVEQAQAGLGAKIVSAWGMTENGAVTLIKLDDDDKLASTTDGCPLPGVEVKV 379

Query: 330 AED----------GELWVRGNSALG-YIGEPL-----TDEWLATGDLATLDEQGFLCIVG 373
            +           G L VR  S  G Y+  P       D W  TGDLA +   G++ I G
Sbjct: 380 IDGDGKTLPPNQIGRLVVRSCSNFGGYLKRPHWNGTDADGWFDTGDLAYMTADGYIRISG 439

Query: 374 RKKNLIITPFGRNIAPEWIES--HAQVWLPQCRFVVVGDDEVG 414
           R K++II   G NI    +E+  +    + Q   V   D+ +G
Sbjct: 440 RSKDVIIRG-GENIPVVEVEALLYKHPAVAQVAIVAYPDERLG 481