Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., AMP-dependent synthetase and ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 87.4 bits (215), Expect = 1e-21
 Identities = 83/287 (28%), Positives = 129/287 (44%), Gaps = 38/287 (13%)

Query: 148 FTSGSTGTPKGVCLSEENL--ERVTLAIAEQMSAQVEQHLVMLPLATLLENITGIYVPLL 205
           +TSG+TG  KGV L+  N+  +  T+    Q+ A  ++ L +LPL+   E   G+ +P+L
Sbjct: 186 YTSGTTGHSKGVVLTHRNIVWDADTVKTIVQL-APGDRMLSILPLSHTYECTLGLVLPVL 244

Query: 206 LGVTSSVLFGESVG---LSGSSQFSPTQFANVLSVYQP--SSLVLTPALLMALIQVVKQA 260
            G     +         L   +Q  PT   +V  V +    S VL       L + +   
Sbjct: 245 NGAHVYYMDKPPTARALLPALAQVRPTAMLSVPLVIEKIFKSAVLPKFTDTWLKRQLYAL 304

Query: 261 PELAKSLQWVA----------------VGGARVAAELIHSARALGIPAYEGYGLSECASV 304
           P + + L  +A                +GGA +A ++    R  G P   GYGL+E + +
Sbjct: 305 PFVRRKLHAMAGKKLLQTFGGALRIFCIGGAAIAPDVERFLREAGFPYAIGYGLTETSPL 364

Query: 305 VSMNTPQHDQPGSCGKPLSHLQIQL------AEDGELWVRG-NSALGYIGEP-------L 350
           V+   P   +  + G PL+ +++++        +GE+ VRG N    Y   P        
Sbjct: 365 VAGCGPADTRLTATGWPLTGVEVRIDAPDPTTGEGEILVRGPNVMREYAKAPEITASVFT 424

Query: 351 TDEWLATGDLATLDEQGFLCIVGRKKNLIITPFGRNIAPEWIESHAQ 397
            D W  TGDL   D  G+L I GR KN+I+ P G NI PE +E+  Q
Sbjct: 425 EDGWFRTGDLGKFDRDGYLYIKGRLKNVIVGPSGENIYPEEVEAIIQ 471