Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 106/462 (22%), Positives = 180/462 (38%), Gaps = 93/462 (20%)

Query: 31  IALNYSQLLERVDLIANQLQRLS---ANCIALRAQNSVDWVALDLAAMWSHIVMVPVPTF 87
           +   Y +  ER DL+A  L  +     + I + A+N  DW+    A     +V+V V T 
Sbjct: 32  LRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTVNTA 91

Query: 88  FTSEQVAHLLNEANV---------------ELCLGDWPELGSPSLTVGGFDAWHYQGN-- 130
           + S ++A+++ ++++               E+     PEL +        + + Y  N  
Sbjct: 92  YKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKLNSEEFPYLKNVI 151

Query: 131 -----KPR---NRPNRVLAGTQ-------------------KITFTSGSTGTPKGVCLSE 163
                K R   N    +L G                      + +TSG+TG PKGV L+ 
Sbjct: 152 YVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLDSDDVINMQYTSGTTGFPKGVMLTH 211

Query: 164 ENLERVTLAIAEQMSAQVEQHLVM-LPLATLLENITGIYVPLLLGVTSSVLFGESVGLSG 222
           +N+      I E+     E+ L + +PL      + G+   L  G T  +L         
Sbjct: 212 KNILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVLALLTHGGTLVML--------- 262

Query: 223 SSQFSPTQFANVLSVYQPSSLVLTPALLMALIQVVKQAPELAKSLQWVAVGGARVAAELI 282
              F P      +   + +++   P + +A             SL+   + G+    E +
Sbjct: 263 -EIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLSSLRTGIMAGSTCPIEAM 321

Query: 283 HSA------RALGIPAYEGYGLSECASVVSMNT---PQHDQPGSCGKPLSHLQIQLAED- 332
                    R + I     YGL+E + V +M +   P   +  S GK + H ++++ +  
Sbjct: 322 KKVMSDMYMREITI----SYGLTEASPVFTMTSVDDPFEKRVESVGKAMPHCEVKIIDPE 377

Query: 333 ----------GELWVRGNSAL-GYIGEPLT-------DEWLATGDLATLDEQGFLCIVGR 374
                     GE+  RG + + GY   P         D WL +GDLA  DE G+  IVGR
Sbjct: 378 TGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDEDGYYKIVGR 437

Query: 375 KKNLIITPFGRNIAPEWIES--HAQVWLPQCRFVVVGDDEVG 414
            K++II   G NI P  IE   +    +   + V + D++ G
Sbjct: 438 IKDMIIRG-GENIYPREIEEFLYTMPGINDAQVVGIPDEKYG 478