Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., putative long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 95.1 bits (235), Expect = 6e-24
 Identities = 120/514 (23%), Positives = 206/514 (40%), Gaps = 106/514 (20%)

Query: 29  ERIALNYSQL---LERVDLIANQLQRLSANCIALRAQNSVDWVALDLAAMWSHIVMVPVP 85
           E +   Y Q+   + R+ L+         + IA+  +N+  W    +A +    ++VP+ 
Sbjct: 28  ESVHYTYGQVAGEIARMHLLFKHCSLRRGDKIAVIGKNNAHWCIAYMATITYGAIIVPIL 87

Query: 86  TFFTSEQVAHLLNEA-NVELCLGD--WPELGSPSLTV--GGFDAWHYQGNKPRNRP---- 136
             FT   V H++N + +V L   D  W  L    LT   G F    ++    R+      
Sbjct: 88  QDFTPNDVHHIVNHSESVFLFTSDSIWESLEEEKLTGLRGVFSLTDFRCLYQRDGETIQK 147

Query: 137 ------NRVLAGTQK-------------------ITFTSGSTGTPKGVCLSEENLE-RVT 170
                 + + A   K                   + +TSG+TG  KGV L+  NL   VT
Sbjct: 148 FLVHLNDEMYAAYPKGFTREDIQYTTLSNDKVMLLNYTSGTTGFSKGVMLTGNNLAGNVT 207

Query: 171 LAIAEQMSAQVEQHLVMLPLATLLENITGIYVPLLLGVTSSVLFGESVGLSGSSQFSPTQ 230
             I  ++  + ++ L  LPLA    +  G     L    ++   G  V L G +  SP  
Sbjct: 208 FGIRTELLKKGDKVLSFLPLA----HAYGCAFDFL----TATAVGTHVTLLGKTP-SPKI 258

Query: 231 FANVLSVYQPSSLVLTPALLMALIQVVKQAPELAKSLQW--------------------- 269
                   +P+ ++  P ++  + + V Q     K ++W                     
Sbjct: 259 IMKAFEEVKPNLIITVPLVIEKIYKNVIQPLINKKGMKWALNIPLLDTQIYNQIRKKLID 318

Query: 270 --------VAVGGARVAAELIHSARALGIPAYEGYGLSECASVVSMNTPQHDQPGSCGKP 321
                   + +GGA +  E+      +  P   GYG++EC  ++S         GS GK 
Sbjct: 319 ALGGRFKEIIIGGAAMNQEVEEFFYKIKFPFTIGYGMTECGPLISYAPWNEFILGSSGKV 378

Query: 322 LSHLQIQL------AEDGELWVRG-NSALGYIGEP-------LTDEWLATGDLATLDEQG 367
           L  ++ ++      AE GE+ VRG N  +GY   P         D WL TGDL T+D  G
Sbjct: 379 LDIMEARIYKENPEAETGEIQVRGENVMVGYYKNPEATQEVFTEDGWLRTGDLGTMDASG 438

Query: 368 FLCIVGRKKNLIITPFGRNIAPEWIESHAQVWLPQCRFVVVGDDEVGLVAVI-------- 419
            + I GR K++I++  G+NI PE +E+     LP     +V +    LVA++        
Sbjct: 439 NIFIRGRLKSMILSSSGQNIFPEELEAKLNN-LPFILESLVIERNKKLVALVYADYEALD 497

Query: 420 -------DRLMPDLEQRVQQINHQLPDYAQIQQL 446
                  D L   +++ ++ +N+ +  Y ++ ++
Sbjct: 498 SLGLNNPDNLKTIMDENLKNLNNNVAAYEKVSKI 531