Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 552 a.a., putative long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 89.4 bits (220), Expect = 3e-22
 Identities = 118/510 (23%), Positives = 200/510 (39%), Gaps = 123/510 (24%)

Query: 39  LERVDLIANQLQRLSANCIALRAQNSVDWVALDLAAMWSHIVMVPVPTFFTSEQVAHLLN 98
           +E++ +I  +      + IA+  +NS  W    LA +    V+VP+   F ++ V +++N
Sbjct: 39  IEKLHIIFEESGIRKGDKIAVCGRNSSHWGVTFLATLTYGAVIVPILHEFKADNVHNIVN 98

Query: 99  EANVELC-LGD--WPELGSPSLTV------------------------------------ 119
            +  +L  +GD  W  L   ++ +                                    
Sbjct: 99  HSEAKLLFVGDMVWENLNESAMPLLEGILMMNDFTLLVSRSERLTHAREHLNEMFGKKYP 158

Query: 120 GGFDAWHYQGNKPRNRPNRVLAGTQKITFTSGSTGTPKGVCLSEENLERVTLAIAEQMSA 179
             F   H + +K  + P  +      I +TSG+T   KGV L   +L   T    E +  
Sbjct: 159 KNFRKEHIEYHK--DEPEELAV----INYTSGTTSYSKGVMLPYRSLWSNTKFAYEVLEL 212

Query: 180 QVEQHLV-MLPLATLLENITGIYVPLLLGVTSSVLFGESVGLSG---SSQFSPTQFANVL 235
           +    +V MLP+A +             G+    L+  SVG      +   SP       
Sbjct: 213 KAGDKIVSMLPMAHMY------------GLAFEFLYEFSVGCHIYFLTRMPSPKIIFQAF 260

Query: 236 SVYQPSSLVLTPALLMALIQ-------------VVKQAP------------ELAKSL--- 267
              +P+ +V  P ++  +I+             ++ + P            E+ K+    
Sbjct: 261 EEVKPNLIVAVPLIIEKIIKKSVLPKLETPTMKILLKVPIINDKIKATIREEMIKAFGGN 320

Query: 268 -QWVAVGGARVAAELIHSARALGIPAYEGYGLSECASVVSMNTPQHDQPGSCGKPLSHLQ 326
            + + VGGA    E+    + +  P   GYG++EC  ++        +PGSCGK    + 
Sbjct: 321 FREIIVGGAAFNQEVEQFLKMIDFPYTVGYGMTECGPIICYEDWTRFKPGSCGKAAPRMD 380

Query: 327 IQLAED------GELWVRG-NSALGYIGEPLTDE-------WLATGDLATLDEQGFLCIV 372
           +++         GE+  +G N  LGY       E       WL TGDLA +D +G + I 
Sbjct: 381 VRVLSSDPENIVGEIVCKGPNVMLGYYKNSEATEAVIDKDGWLHTGDLALMDAEGNITIK 440

Query: 373 GRKKNLIITPFGRNIAPEWIESHAQVWLPQCRFVVVGDDE--VGLV-------------- 416
           GR KNL+++  G+NI PE IE            ++V  +E  VGLV              
Sbjct: 441 GRSKNLLLSASGQNIYPEEIEDKLNNLPYVSESIIVQQNEKLVGLVYPDFDEAFAHGLKN 500

Query: 417 AVIDRLMPDLEQRVQQINHQLPDYAQIQQL 446
             I+R+M   E+    +N  LP Y+QI ++
Sbjct: 501 EDIERVM---EENRVALNAMLPAYSQILKM 527