Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 125/531 (23%), Positives = 206/531 (38%), Gaps = 150/531 (28%)

Query: 56  CIALRAQNSVDWVALDLAAMWSHIVMVPVPTFFTSEQVAHLLNEANVELCLGDWPELGS- 114
           C+ L +QN   W   D+  + S  V+VP+    T EQ + ++N+A  ++   D  +  + 
Sbjct: 64  CVIL-SQNCPQWTCADIGTLKSRAVVVPIYPTSTLEQASFIINDAAAKVIFVDDAKQYAL 122

Query: 115 --------PSLT-VGGFDA---------------------WHYQGNKPRNRPNRVLAGTQ 144
                   P+L  V  FDA                     +       +   +  L    
Sbjct: 123 ACELQKQCPTLEHVIVFDASVELAQDKAQHQHLDSLLAKEYGQSAELEQRLKDANLDDLL 182

Query: 145 KITFTSGSTGTPKGVCLSEENLERVTLAIAEQMSAQVEQHLVMLPLATLLENITGIYVPL 204
            + +TSG+TG PKGV L   N           M++ V QH  +LP  T   +++  ++PL
Sbjct: 183 TLIYTSGTTGDPKGVMLDYRN-----------MASTVRQHDQILPFTT--GDVSLAFLPL 229

Query: 205 L----LGVTSSVLF--GESVGLSGSSQFSPTQFANVLSVYQPSSLVLTPALLMALI---- 254
                 G +  VL   G +V L  + +         +S  +P +L + P  L  +     
Sbjct: 230 SHVFERGWSFYVLCRGGHNVYLQNTQRVK-----EAISAVRPHTLCVVPRFLEKVYSAVQ 284

Query: 255 -QVVKQAPELAKSLQWV--------------AVGGA------RVAAELIHSA-------- 285
            +V K A    K   W               A GG       R+A +L++S         
Sbjct: 285 DKVAKSAEGRKKLFAWAMGVGERQFEVSQGRAKGGLWLSLQWRLAHKLVYSKLQAVLGGR 344

Query: 286 -------------------RALGIPAYEGYGLSECASVVSMNTPQHDQPGSCGKPLSHLQ 326
                               A+GIP   GYG++E  + V+ NT  +   GS GK L  ++
Sbjct: 345 LKFMPCGGAALDLNVASFFHAIGIPVLCGYGMTETNATVTCNTLDNRVAGSNGKVLPEIE 404

Query: 327 IQLAEDGELWVRGNSAL-GYIGEP------LTDEWLATGDLATLDEQGFLCIVGRKKNLI 379
           ++L +D E+ VRG++ + GY   P        D WL TGD   LD  G L I  R K L+
Sbjct: 405 VKLGKDDEILVRGDTVMRGYYNRPEDTAAAFEDGWLKTGDAGRLDANGNLFITDRIKELM 464

Query: 380 ITPFGRNIAPEWIESHAQVWLPQCRFV----VVGDDEVGLVAVI---------------- 419
            T  G+ IAP+ +E      + +C F+    V+ D    + A+I                
Sbjct: 465 KTSNGKYIAPQRVEG----TVGRCPFIEQVAVIADARNYVTALIVPAFESLEAWAKDKGL 520

Query: 420 -----------DRLMPDLEQRVQQINHQLPDYAQIQQLLFVNQPSAWQAWL 459
                        ++   EQR++ +  +L  + QI++   + +  + +A L
Sbjct: 521 KYESPIELLRHSHVVEHFEQRLKHLQQELAGFEQIKKFTLLPEAFSMEAGL 571