Pairwise Alignments

Query, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  219 bits (557), Expect = 2e-61
 Identities = 146/441 (33%), Positives = 233/441 (52%), Gaps = 31/441 (7%)

Query: 8   SYSNAQHEVGEVYDARLGQSAKLLLIATSVSANEFADRNQHEQFNLWMQHIQRLSKANDD 67
           SY +A HE+ E++DA+L QSA+L+        +  A R      +  +      ++ +  
Sbjct: 29  SYRDASHEIEELFDAQLAQSARLVQGLVGHEMDPQAHRALQAALDAAVN-----ARRDQG 83

Query: 68  VATLFGHPYEQYLLFQFYR-EGDLLFSS-------------DTHLPALSLGRDANGFSDI 113
           V    GH YE  L FQ Y  +G  L  S                 PA  L R + G+ D+
Sbjct: 84  VP---GHDYETKLGFQVYAADGSTLLQSAGAPNGALQQLQAGLGAPATPLARLSAGYHDV 140

Query: 114 TLNGESWRYFQLSLPDQEKGKQYVLVAEKQSIRDEAINEIALSTALPQLILILCLIVVLV 173
            L+G +WR F L      +   ++L++E+  +R E + +IA  + LP LI +  L +++ 
Sbjct: 141 MLDGHAWRLFLLQ---DREDDLWILLSERGDVRGELVGKIARRSLLPDLIGLPLLALLIW 197

Query: 174 VLIERSFQPIQALKAAIALRSIHKLDRIYVEKPTVELLPLVETLNQLLNELEQAWQREKR 233
             +    +P+  +   +  R    L  + +     EL P+  +LN+LL ++ Q  +REKR
Sbjct: 198 FAVGWGLRPLARMAQLLKSRDPDNLAPLLLAPLPQELEPVAASLNRLLQQVNQLIEREKR 257

Query: 234 FTRMAAHELKTPLTVLRVNAENALRSTNQEQLKQDLERIFKGIERTDRLIHQLLMLAKVE 293
           F   AAHEL+TPL VLR++A+NA ++ ++++  Q LE++  G++RT R++ QLL LA++E
Sbjct: 258 FIADAAHELRTPLAVLRIHAQNAQQAQDEQERAQALEQLVVGVDRTTRVVTQLLTLARLE 317

Query: 294 -STQTLRKQPVELANVIKQVIADLAPIAFKQDQQLSFHGESS---RLWGDELLLGILFKN 349
            S Q LR  P++L  + +  +A+L P+A  QDQ L+   +      L GD   L  L +N
Sbjct: 318 PSAQQLRLAPLDLRALARATLAELTPLAIAQDQTLTLEVDEQADCSLTGDAASLTTLLQN 377

Query: 350 LLDNAIRYSGHSSQIAVELSDHDGEIEVRVSDTGAAIDDLTREKMFDNFYRANSQKGDGA 409
           L+ NA+ Y+ H  QI V+L     ++ + V D+G  I    R ++F+ F+R     G GA
Sbjct: 378 LVSNALEYTPHGGQIEVQLHGDAEQLILAVDDSGPGISAELRPQLFERFFRLGG--GQGA 435

Query: 410 GLGMSICRDIAALHGGQVLLL 430
           GLG+SI   IA LHG  V LL
Sbjct: 436 GLGLSIVARIAELHGASVELL 456