Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Pseudomonas stutzeri RCH2

 Score =  209 bits (532), Expect = 2e-58
 Identities = 155/499 (31%), Positives = 257/499 (51%), Gaps = 44/499 (8%)

Query: 26  IVTALLSVQQLAISTAQ----ETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLP 81
           I   L+ V+ LA+        + +VE ++F++   + L ++GE+GSGKS+ A++I+  LP
Sbjct: 6   IAENLVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLP 65

Query: 82  AGL--RSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHR 139
             L    QG+I   GQ   +  +     + G ++A++ QEP  +LNP+   G+Q+ EV  
Sbjct: 66  YPLARHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLE 125

Query: 140 LVMGNHA-ASAALTDSAFQQVALHQDLSK---YPHQLSGGMAQRVAYLCATQTQAPLLIA 195
           +  G    A+ A T    + V + +   +   YPH+LSGG  QRV    A   +  LLIA
Sbjct: 126 IHKGLRGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIA 185

Query: 196 DEPTKGLDASRRDQIIALLQAQLTR--GALLTITHDIEVAEKLGGTIIVMRKGVIQEQGP 253
           DEPT  LD + + +I+ LL+    R   ALL I+HD+ +  ++   + VM++G + EQ  
Sbjct: 186 DEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQAL 245

Query: 254 AQQVLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAMHRGEKC---------- 303
            + +   PQ  YT+ L+ A+P   P   +     PLL VD++ +    K           
Sbjct: 246 CEDLFRAPQHPYTQELLAAEPSGGPVAVEE--APPLLEVDDLRVWFPIKKGLLRRTVDHI 303

Query: 304 -LFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRIH----------RLQAI 352
              D ++F+L  G+ LGI G+SG GKSTL   +L LL  S+G I           + Q  
Sbjct: 304 KAVDGVNFSLPKGQTLGIVGESGSGKSTLGLAILRLLG-SRGEIRFQGQHLQSMSQRQVR 362

Query: 353 PLGKALKL-YQDPPSALAKSVTLQTLLEDVCRQHSV------ERSQIPRLLERLALSPNL 405
           PL + +++ +QDP  +L+  +++  ++ +    H +      E++ I  L+E + L P  
Sbjct: 363 PLRRQMQVVFQDPFGSLSPRMSVGQIVGEGLHIHRMGNAKEQEQAIIEALVE-VGLDPET 421

Query: 406 LSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCA 465
             R  ++ SGG+ QR AI RAL+ +P L++ DEPTS LD       ++L+  L  +    
Sbjct: 422 RHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLT 481

Query: 466 LVLISHDKLALEKTCHRVL 484
            + ISHD   +    H+++
Sbjct: 482 YLFISHDLAVVRALSHQMM 500



 Score =  118 bits (295), Expect = 6e-31
 Identities = 83/248 (33%), Positives = 133/248 (53%), Gaps = 13/248 (5%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           V+ ++F L   Q L I+GE+GSGKS L  AI+  L     S+G+I   GQ+    +Q + 
Sbjct: 306 VDGVNFSLPKGQTLGIVGESGSGKSTLGLAILRLLG----SRGEIRFQGQHLQSMSQRQV 361

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTDSAFQQVALH 162
             L  +Q+ V+ Q+P+ +L+P M  G+ V E   +HR  MGN          A  +V L 
Sbjct: 362 RPL-RRQMQVVFQDPFGSLSPRMSVGQIVGEGLHIHR--MGNAKEQEQAIIEALVEVGLD 418

Query: 163 QDLS-KYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLTRG 221
            +   +YPH+ SGG  QR+A   A   +  L++ DEPT  LD + + Q++ LL++   + 
Sbjct: 419 PETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKY 478

Query: 222 AL--LTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADPRYWPT 279
            L  L I+HD+ V   L   ++V+++G + EQG A  + + PQ  YT+ L+ +      T
Sbjct: 479 NLTYLFISHDLAVVRALSHQMMVVKQGQVVEQGAAADIFAAPQHPYTQQLLESAFMAPGT 538

Query: 280 TPQSKTGE 287
             Q + G+
Sbjct: 539 AEQPEEGQ 546