Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  250 bits (638), Expect = 1e-70
 Identities = 178/480 (37%), Positives = 260/480 (54%), Gaps = 40/480 (8%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLR-SQGKIALFGQYQHQRTQAE 104
           V ++SF++   + + I+GE+GSGKS +ANAI+G LP     + G++ + G       + E
Sbjct: 27  VRNVSFQVARGETVAIVGESGSGKSTMANAILGLLPDNAAITGGELHVDGHDLGHAGERE 86

Query: 105 REALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGN-HAASAALTDSAFQQVALHQ 163
           +  + G  + ++PQ+P  +LNP +R G Q+AE   L  G  + A  A      QQV L +
Sbjct: 87  KRRIRGGTIGLVPQDPMVSLNPTLRIGRQIAEALLLAHGRRYPAVDADVLELLQQVGLDK 146

Query: 164 DLSK---YPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLT- 219
            + +   YPH+LSGGM QRV    A      L+IADEPT  LD + + +I+  LQ  +  
Sbjct: 147 PVLRARQYPHELSGGMRQRVLIAIALAGNPRLIIADEPTSALDVTVQRRILDHLQRLVAE 206

Query: 220 RG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADPRYW- 277
           RG +LL ITHD+ VA      ++VM KG + EQGP QQ+L  P+  YT+ALI A P +  
Sbjct: 207 RGISLLIITHDLGVAADRADRVLVMNKGELVEQGPPQQILIAPRHAYTRALIAAAPAFGQ 266

Query: 278 ---PTTPQ--SKTGEPLLTVDNIAMH------RGEKCLFDSL---SFTLSAGEILGISGD 323
              P TP+  + +  PLLT++NI         +GE   F +L   +F + AG+ L I G+
Sbjct: 267 RKSPATPRPVASSARPLLTLNNIGKTYRLPYVKGEDTDFQALQDVNFKVYAGQTLAIVGE 326

Query: 324 SGCGKSTLADLLLGLLKPSQGRIHR----------LQAIPLGKALKLYQ-------DPPS 366
           SG GKST   + LGL KP+ GR+             +  PL + ++L Q       DP  
Sbjct: 327 SGSGKSTALRIALGLEKPTHGRVLLDDQDVTDLGWREFRPLRRRIQLVQQNPFAALDPRF 386

Query: 367 ALAKSVTLQTLLEDVCRQHSVERSQIPRLLERLALSPNLLSRKANQVSGGELQRFAILRA 426
            L +S+    +   + +   +E++   RL+ER+ L    L R   ++SGG+ QR AI RA
Sbjct: 387 TLFESIVEPLVSFGLLKGRELEQAA-RRLIERVQLPVAYLDRLPRELSGGQRQRVAIARA 445

Query: 427 LLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRVLSL 486
           L  +P LL+ DEP S LD    A  L L++EL  E G A VL+SHD   +    H+VL L
Sbjct: 446 LALQPDLLLLDEPVSALDVSVQAQILDLLVELQAESGIAYVLVSHDLAVVASVAHQVLVL 505



 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 76/236 (32%), Positives = 119/236 (50%), Gaps = 14/236 (5%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           ++ ++F+++A Q L I+GE+GSGKS      +G       + G++ L  Q        E 
Sbjct: 308 LQDVNFKVYAGQTLAIVGESGSGKSTALRIALG---LEKPTHGRVLLDDQDVTDLGWREF 364

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HRLVMGNHAASAA--LTDSAFQQVA 160
             L  +++ ++ Q P+ AL+P     E + E      L+ G     AA  L +     VA
Sbjct: 365 RPL-RRRIQLVQQNPFAALDPRFTLFESIVEPLVSFGLLKGRELEQAARRLIERVQLPVA 423

Query: 161 LHQDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALL-QAQLT 219
               L + P +LSGG  QRVA   A   Q  LL+ DEP   LD S + QI+ LL + Q  
Sbjct: 424 Y---LDRLPRELSGGQRQRVAIARALALQPDLLLLDEPVSALDVSVQAQILDLLVELQAE 480

Query: 220 RG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP 274
            G A + ++HD+ V   +   ++V++ G   EQG A+ V + P++ YT+ LI A P
Sbjct: 481 SGIAYVLVSHDLAVVASVAHQVLVLKHGKTVEQGLAEDVFARPEASYTQELIAAIP 536