Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  214 bits (546), Expect = 4e-60
 Identities = 158/493 (32%), Positives = 258/493 (52%), Gaps = 45/493 (9%)

Query: 30  LLSVQQLAISTAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAG-LRSQG 88
           L+ ++ L ++     +V  +S ++   + L ++GE+GSGKS+ A++I+  LPA  + +QG
Sbjct: 5   LIEIRDLRVAFNGHEVVHGVSLDIRRGECLALVGESGSGKSVTAHSILRLLPAKTVSTQG 64

Query: 89  KIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HRLVMGNH 145
            I   G      +  +  +L G ++A++ QEP  +LNP+    +Q+ E+   H+ + G  
Sbjct: 65  SIHYDGLDLVTASDKQLRSLRGNRVAMIFQEPMSSLNPLHTVEKQIVEILVTHKGLKGKA 124

Query: 146 AASAALTDSAFQQVALHQDLSK---YPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGL 202
           A S  L     + V +   LS+   YPHQLSGG  QR+    A   +  LLIADEPT  L
Sbjct: 125 ALSRTL--ELLELVGIRDPLSRLKAYPHQLSGGQRQRIMIAMALANEPDLLIADEPTTAL 182

Query: 203 DASRRDQIIALLQA--QLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSH 260
           D + + +I+ LL++  Q    +LL I+HD+ +  ++   + VMR+G I EQ   Q +   
Sbjct: 183 DVTVQVKILELLKSLQQRLNMSLLLISHDLNLVRRIAQRVCVMREGEIVEQADCQTLFDS 242

Query: 261 PQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNI--------AMHRGEKCLF---DSLS 309
           PQ  Y++ LINA+P   P    S     LL+V ++        A  + E       D +S
Sbjct: 243 PQHPYSRLLINAEPDGEPVP--STHSNTLLSVQDLKVWFPLGKAWFKREPQYVKAVDGVS 300

Query: 310 FTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRI------------HRLQAIPLGKA 357
           F L  G+ LGI G+SG GKSTL   +L L+  S+G I            H ++  PL + 
Sbjct: 301 FELLKGKTLGIVGESGSGKSTLGQAILRLVD-SEGSIRFGTKELSLHSQHLMR--PLRRQ 357

Query: 358 LKL-YQDPPSALAKSVTLQTLLEDVCRQHSV----ERSQ-IPRLLERLALSPNLLSRKAN 411
           L++ +QDP  +L+  +T++ ++ +    H++    ER Q + R+L+ + L P    R  +
Sbjct: 358 LQVVFQDPFGSLSPRMTVEQIIAEGLVTHNIGTPKEREQTVIRVLQEVGLDPATRHRYPH 417

Query: 412 QVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISH 471
           + SGG+ QR +I RAL+  P L++ DEPTS LD       + L+ +L    G   + ISH
Sbjct: 418 EFSGGQRQRVSIARALVLEPDLILLDEPTSALDRTVQKQIVALLRDLQIRHGLTYLFISH 477

Query: 472 DKLALEKTCHRVL 484
           D   +    H ++
Sbjct: 478 DLAVVHALAHDLI 490



 Score =  110 bits (274), Expect = 2e-28
 Identities = 79/233 (33%), Positives = 122/233 (52%), Gaps = 13/233 (5%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           V+ +SFEL   + L I+GE+GSGKS L  AI+  +     S+G I  FG  +        
Sbjct: 296 VDGVSFELLKGKTLGIVGESGSGKSTLGQAILRLVD----SEGSIR-FGTKELSLHSQHL 350

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTDSAFQQVALH 162
                +QL V+ Q+P+ +L+P M   + +AE    H +  G             Q+V L 
Sbjct: 351 MRPLRRQLQVVFQDPFGSLSPRMTVEQIIAEGLVTHNI--GTPKEREQTVIRVLQEVGLD 408

Query: 163 QDLS-KYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLTRG 221
                +YPH+ SGG  QRV+   A   +  L++ DEPT  LD + + QI+ALL+    R 
Sbjct: 409 PATRHRYPHEFSGGQRQRVSIARALVLEPDLILLDEPTSALDRTVQKQIVALLRDLQIRH 468

Query: 222 AL--LTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINA 272
            L  L I+HD+ V   L   +IV++ G + EQGP++++ + PQ  YT+ L+ +
Sbjct: 469 GLTYLFISHDLAVVHALAHDLIVIKDGKVVEQGPSREIFAAPQQAYTQELLRS 521