Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  233 bits (593), Expect = 2e-65
 Identities = 171/502 (34%), Positives = 260/502 (51%), Gaps = 50/502 (9%)

Query: 30  LLSVQQLAIST--AQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQ 87
           LLS+ QL+++   +++  ++ LS EL A + L ++GE+G GKS L  AI+  LP G   Q
Sbjct: 3   LLSIDQLSVTYPGSEQPALQQLSLELAAGERLGLVGESGCGKSTLGRAILRLLPPGSHQQ 62

Query: 88  GKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGN 144
           G I L GQ   Q      +   G Q+ ++ Q+P   L+P+   G+ + E   VHR  +  
Sbjct: 63  GDIRLAGQALGQLQGRSLQRFRGGQVGLVFQDPMTRLDPLQTIGDHLLETLQVHRPHLSR 122

Query: 145 HAASAALTDSAFQQVALHQDL-SKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLD 203
             A      S  ++V +  +  S+YPHQ SGGM QRVA   A   Q  L++ADEPT  LD
Sbjct: 123 RQAKQQAL-SWLERVRIPANRWSQYPHQFSGGMRQRVAIALALLLQPRLVVADEPTTSLD 181

Query: 204 ASRRDQIIALLQAQLTR------GALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQV 257
            +    + A +  +LTR       +LL I+HD+ +       I V+ +G + E GP   V
Sbjct: 182 VT----VAAEILQELTRLCSEENTSLLLISHDLPMVAAYCDRIAVLYQGQLVETGPTTAV 237

Query: 258 LSHPQSDYTKALINADPRYWPTTPQSKTGE-PLLTVDNIAMH-----------RGEKCLF 305
           L+ PQ  YT+ L+ +      ++P +     PLL ++N+  H           RG   + 
Sbjct: 238 LTRPQHPYTQTLLQSARAAIASSPSTLPATTPLLQLENVTQHFRVAQSWLQGWRGGGEIV 297

Query: 306 ---DSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRI----HRLQAIP----- 353
              D LS  +  GE LG+ G+SGCGKSTL   +L LL+PSQG++      L  +P     
Sbjct: 298 RAVDGLSLEVWPGETLGLIGESGCGKSTLLRTILQLLRPSQGKVLFQGQDLTQLPDRRLR 357

Query: 354 -LGKALKL-YQDPPSALAKSVTLQTLLEDVCRQHSVERS-----QIPRLLERLALSP--N 404
            L + L+L +QDP + L   +T+   + D  +   + R      Q+  +LE++ L+P   
Sbjct: 358 SLRRELQLIFQDPAACLNPRLTIGDAIADPLKIQGLARGAAAKQQVLAILEQVGLTPAPT 417

Query: 405 LLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGC 464
            + R  +Q+SGG+ QR AI RAL+TRP L++ DEP S LD    A  L L+ EL Q++  
Sbjct: 418 WIDRYPHQLSGGQQQRVAIARALITRPKLVLCDEPVSMLDATVQAQVLALMQELKQQLNL 477

Query: 465 ALVLISHDKLALEKTCHRVLSL 486
             + ++HD     + C RV  L
Sbjct: 478 TYLFVTHDLRVAREFCDRVAVL 499



 Score =  120 bits (302), Expect = 9e-32
 Identities = 82/235 (34%), Positives = 129/235 (54%), Gaps = 10/235 (4%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           V+ LS E+   + L ++GE+G GKS L   I+  L     SQGK+   GQ   Q      
Sbjct: 300 VDGLSLEVWPGETLGLIGESGCGKSTLLRTILQLLRP---SQGKVLFQGQDLTQLPDRRL 356

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLV-MGNHAASAALTDSAFQQVALHQD 164
            +L  ++L ++ Q+P   LNP +  G+ +A+  ++  +   AA+     +  +QV L   
Sbjct: 357 RSL-RRELQLIFQDPAACLNPRLTIGDAIADPLKIQGLARGAAAKQQVLAILEQVGLTPA 415

Query: 165 ---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQA--QLT 219
              + +YPHQLSGG  QRVA   A  T+  L++ DEP   LDA+ + Q++AL+Q   Q  
Sbjct: 416 PTWIDRYPHQLSGGQQQRVAIARALITRPKLVLCDEPVSMLDATVQAQVLALMQELKQQL 475

Query: 220 RGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP 274
               L +THD+ VA +    + V+++G I E GPA QVL+ P+  YT++L+ + P
Sbjct: 476 NLTYLFVTHDLRVAREFCDRVAVLQRGKIVEIGPAAQVLTQPEHPYTRSLLASLP 530